RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 MYCNOSP40205 109 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 AMMECR1LQ6DCA0 310 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 NPFFR1Q9GZQ6 430 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 C11orf71Q6IPW1 123 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
FGFR2-222ENST00000604236 C2orf88Q9BSF0 95 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 MGAM2Q2M2H8 2515 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
FGFR2-222ENST00000604236 MAST4O15021 2626 aa11.84□□□□□ -0.51
FGFR2-222ENST00000604236 C2orf70A6NJV1 201 aa11.84□□□□□ -0.51
FGFR2-222ENST00000604236 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
FGFR2-222ENST00000604236 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
FGFR2-222ENST00000604236 RNASE13Q5GAN3 156 aaKnown RBP11.84□□□□□ -0.51
FGFR2-222ENST00000604236 NOTCH1P46531 2555 aa11.84□□□□□ -0.51
FGFR2-222ENST00000604236 DTX2Q86UW9 622 aa11.83□□□□□ -0.51
FGFR2-222ENST00000604236 VPS25Q9BRG1 176 aa11.83□□□□□ -0.51
FGFR2-222ENST00000604236 KIR2DL5BA0A0G2JN68 375 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 KIR2DL5BA0A0G2JPC4 375 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 COX6B1P14854 86 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 KIR2DL5AQ8N109 375 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 TTC9CQ8N5M4 171 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 H3BUT2 72 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 MSMBP08118 114 aa11.83□□□□□ -0.52
FGFR2-222ENST00000604236 TNFRSF6BO95407 300 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 ANXA2RQ3ZCQ2 193 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 KLF12Q9Y4X4 402 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 ZNF56Q15929 161 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 Q8N976 141 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 AJUBAQ96IF1 538 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 IGKV3OR2-268A0A0C4DH90 116 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 K7ERJ3 54 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 C18orf65Q6ZTR6 163 aa11.82□□□□□ -0.52
FGFR2-222ENST00000604236 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 PRR9Q5T870 116 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 MINOS1Q5TGZ0 78 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 C5orf56Q8N8D9 126 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 NPBQ8NG41 125 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 MINOS1-NBL1R4GNA1 71 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 DLEU1O43261 78 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 RPL24P83731 157 aaKnown RBP11.81□□□□□ -0.52
FGFR2-222ENST00000604236 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
FGFR2-222ENST00000604236 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
FGFR2-222ENST00000604236 WI2-2373I1.2A0A1W2PRP0 233 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
FGFR2-222ENST00000604236 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 C20orf144Q9BQM9 153 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 ATP5L2Q7Z4Y8 100 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 MYOZ3Q8TDC0 251 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 ESDP10768 282 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 SCGB1D4Q6XE38 83 aa11.8□□□□□ -0.52
FGFR2-222ENST00000604236 F8P00451 2351 aa11.79□□□□□ -0.52
FGFR2-222ENST00000604236 HBDP02042 147 aa11.79□□□□□ -0.52
FGFR2-222ENST00000604236 BBC3Q96PG8 261 aaPredicted RBP11.79□□□□□ -0.52
FGFR2-222ENST00000604236 RNF5Q99942 180 aa11.79□□□□□ -0.52
FGFR2-222ENST00000604236 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
FGFR2-222ENST00000604236 SRSF1Q07955 248 aaKnown RBP eCLIP11.78□□□□□ -0.52
FGFR2-222ENST00000604236 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
FGFR2-222ENST00000604236 UNC79Q9P2D8 2635 aa11.78□□□□□ -0.52
FGFR2-222ENST00000604236 ZNF747Q9BV97 191 aa11.78□□□□□ -0.52
FGFR2-222ENST00000604236 TMEM14CQ9P0S9 112 aa11.78□□□□□ -0.52
FGFR2-222ENST00000604236 NPC2P61916 151 aa11.78□□□□□ -0.52
FGFR2-222ENST00000604236 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
FGFR2-222ENST00000604236 HOXA3O43365 443 aaPredicted RBP11.77□□□□□ -0.52
FGFR2-222ENST00000604236 RAB9AP51151 201 aa11.77□□□□□ -0.52
FGFR2-222ENST00000604236 FBXL19-AS1Q494R0 122 aa11.77□□□□□ -0.52
FGFR2-222ENST00000604236 ZNF492Q9P255 531 aa11.77□□□□□ -0.53
FGFR2-222ENST00000604236 PLP1P60201 277 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 M0QZK8 103 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
FGFR2-222ENST00000604236 IGHV3-38A0A0C4DH36 116 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 CCL25O15444 150 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 SLURP1P55000 103 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 TMEM170BQ5T4T1 132 aa11.76□□□□□ -0.53
FGFR2-222ENST00000604236 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
FGFR2-222ENST00000604236 TMEM8BA6NDV4 472 aa11.75□□□□□ -0.53
FGFR2-222ENST00000604236 Q96MF0 132 aa11.75□□□□□ -0.53
FGFR2-222ENST00000604236 IGHG4P01861 327 aa11.75□□□□□ -0.53
FGFR2-222ENST00000604236 ASIPP42127 132 aa11.75□□□□□ -0.53
FGFR2-222ENST00000604236 RASL11AQ6T310 242 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 B4DSR2 109 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 APOMO95445 188 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 CFHR3Q02985 330 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
FGFR2-222ENST00000604236 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
FGFR2-222ENST00000604236 CYSLTR1Q9Y271 337 aa11.74□□□□□ -0.53
FGFR2-222ENST00000604236 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
FGFR2-222ENST00000604236 CHCHD1Q96BP2 118 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms