RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, human

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA3-204	ENST00000602492	HMGB3	O15347	200 aa	Known RBP	13.88	□□□□□ -0.19
PPFIA3-204	ENST00000602492	FGF8	P55075	233 aa	Predicted RBP	13.88	□□□□□ -0.19
PPFIA3-204	ENST00000602492	LYPD1	Q8N2G4	141 aa		13.88	□□□□□ -0.19
PPFIA3-204	ENST00000602492	EIF4E3	Q8N5X7	224 aa	Known RBP	13.88	□□□□□ -0.19
PPFIA3-204	ENST00000602492	LINC00467	Q9BRT7	94 aa		13.88	□□□□□ -0.19
PPFIA3-204	ENST00000602492	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.88	□□□□□ -0.19
PPFIA3-204	ENST00000602492	TRBV19	A0A075B6N1	114 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492		A0A1W2PRE2	83 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	KLLN	B2CW77	178 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	NBEAP1	P0C6P0	100 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	ERCC8	Q13216	396 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	ANXA2R	Q3ZCQ2	193 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492		Q6ZRN7	208 aa	Predicted RBP	13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	LINC00477	Q96M19	166 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	FAM210A	Q96ND0	272 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	TCEAL7	Q9BRU2	100 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	PRELID1	Q9Y255	219 aa		13.87	□□□□□ -0.19
PPFIA3-204	ENST00000602492	ZNF324	O75467	553 aa	Predicted RBP	13.86	□□□□□ -0.19
PPFIA3-204	ENST00000602492	PYY	P10082	97 aa		13.86	□□□□□ -0.19
PPFIA3-204	ENST00000602492	BCL2	P10415	239 aa		13.86	□□□□□ -0.19
PPFIA3-204	ENST00000602492	BTN1A1	Q13410	526 aa		13.86	□□□□□ -0.19
PPFIA3-204	ENST00000602492	PCNP	Q8WW12	178 aa	Known RBP	13.86	□□□□□ -0.19
PPFIA3-204	ENST00000602492	ICOS	Q9Y6W8	199 aa		13.86	□□□□□ -0.19
PPFIA3-204	ENST00000602492	FAT1	Q14517	4588 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	EREG	O14944	169 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	PAX4	O43316	350 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	NXPH4	O95158	308 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	OR10J4	P0C629	311 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	RNASE4	P34096	147 aa	Known RBP	13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	TCL1A	P56279	114 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	CCL20	P78556	96 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	IQCF2	Q8IXL9	164 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	ARL6IP6	Q8N6S5	226 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	FAM19A4	Q96LR4	140 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	AGPAT4-IT1	Q9H0P7	198 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	PGPEP1	Q9NXJ5	209 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	GNG13	Q9P2W3	67 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	KLF12	Q9Y4X4	402 aa		13.85	□□□□□ -0.19
PPFIA3-204	ENST00000602492	SPINK4	O60575	86 aa		13.84	□□□□□ -0.19
PPFIA3-204	ENST00000602492	GPX1	P07203	203 aa		13.84	□□□□□ -0.19
PPFIA3-204	ENST00000602492	UQCC3	Q6UW78	93 aa		13.84	□□□□□ -0.19
PPFIA3-204	ENST00000602492	VAX2	Q9UIW0	290 aa		13.84	□□□□□ -0.19
PPFIA3-204	ENST00000602492	RBFOX3	A6NFN3	312 aa		13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	EPM2A	B3EWF7	344 aa		13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	EIF3G	O75821	320 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	NDUFB4	O95168	129 aa		13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	CRISP2	P16562	243 aa		13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	ERVFC1-1	P60608	527 aa		13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	ZNF506	Q5JVG8	444 aa		13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492	IBA57	Q5T440	356 aa	Known RBP	13.83	□□□□□ -0.2
PPFIA3-204	ENST00000602492		A0A1B0GV50	99 aa		13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	FAM74A7	A6NL05	159 aa		13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	IGHV3-53	P01767	116 aa		13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	MEF2B	Q02080	365 aa	Predicted RBP	13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	BLNK	Q8WV28	456 aa		13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	AAMDC	Q9H7C9	122 aa		13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	PRO0255	Q9UI72	69 aa		13.82	□□□□□ -0.2
PPFIA3-204	ENST00000602492	SLA	Q13239	276 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	PEA15	Q15121	130 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	TMEM78	Q5T7P6	136 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	CDPF1	Q6NVV7	123 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	C9orf47	Q6ZRZ4	202 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	EXOC3-AS1	Q8N2X6	119 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	OTOR	Q9NRC9	128 aa		13.81	□□□□□ -0.2
PPFIA3-204	ENST00000602492	PDE6D	O43924	150 aa		13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	PAGE4	O60829	102 aa		13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	NFE4	Q86UQ8	179 aa		13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	COMMD7	Q86VX2	200 aa		13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	VGLL1	Q99990	258 aa		13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	MRPL16	Q9NX20	251 aa	Known RBP	13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	TP53TG3	Q9ULZ0	132 aa		13.8	□□□□□ -0.2
PPFIA3-204	ENST00000602492	IGHV1OR15-1	A0A075B7D0	117 aa		13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	TMEM250	H0YL14	139 aa		13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	IGKV2D-40	P01614	121 aa	Predicted RBP	13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	FUS	P35637	526 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	ICAM4	Q14773	271 aa		13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	MRPL23	Q16540	153 aa	Known RBP	13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	TOR2A	Q5JU69	321 aa		13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	ZFAND2A	Q8N6M9	145 aa		13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	C5orf17	Q8NAS9	161 aa		13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	EIF5A2	Q9GZV4	153 aa	Known RBP	13.79	□□□□□ -0.2
PPFIA3-204	ENST00000602492	GGTLC3	B5MD39	225 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492		F6UZH7	168 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	CRYBA4	P53673	196 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	PRR9	Q5T870	116 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	CST9LP1	Q5W188	147 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	C8orf49	Q96NF6	230 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	HHLA3	Q9XRX5	114 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	TNFRSF18	Q9Y5U5	241 aa		13.78	□□□□□ -0.2
PPFIA3-204	ENST00000602492	VPS13B	Q7Z7G8	4022 aa		13.77	□□□□□ -0.2
PPFIA3-204	ENST00000602492	TRAV9-2	A0A087WT02	112 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	SERTM2	A0A1B0GWG4	89 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	UBE2G2	P60604	165 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	RAN	P62826	216 aa	Known RBP	13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	LYPD5	Q6UWN5	251 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	HIST1H2BA	Q96A08	127 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	C11orf52	Q96A22	123 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	ZNF492	Q9P255	531 aa		13.77	□□□□□ -0.21
PPFIA3-204	ENST00000602492	ZNF415	Q09FC8	603 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms