RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 UBE2D3P61077 147 aa17.13■□□□□ 0.33
CAPN12-212ENST00000601953 UBE2D2P62837 147 aa17.13■□□□□ 0.33
CAPN12-212ENST00000601953 TMEM95Q3KNT9 176 aa17.13■□□□□ 0.33
CAPN12-212ENST00000601953 TEX29Q8N6K0 151 aa17.13■□□□□ 0.33
CAPN12-212ENST00000601953 DCHS2Q6V1P9 2916 aa17.12■□□□□ 0.33
CAPN12-212ENST00000601953 PSMB2P49721 201 aa17.12■□□□□ 0.33
CAPN12-212ENST00000601953 HES1Q14469 280 aa17.12■□□□□ 0.33
CAPN12-212ENST00000601953 ZNF575Q86XF7 245 aa17.12■□□□□ 0.33
CAPN12-212ENST00000601953 A0A1W2PPR1 153 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 ZNF688P0C7X2 276 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 VMO1Q7Z5L0 202 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 SBSPONQ8IVN8 264 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 IGFBPL1Q8WX77 278 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 HRNRQ86YZ3 2850 aaPredicted RBP17.11■□□□□ 0.33
CAPN12-212ENST00000601953 MINOS1Q5TGZ0 78 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 MINOS1-NBL1R4GNA1 71 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 ZZEF1O43149 2961 aa17.11■□□□□ 0.33
CAPN12-212ENST00000601953 UBE2D1P51668 147 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 LAGE3Q14657 143 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 Q8N6K4 173 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 ZNF491Q8N8L2 437 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 UFC1Q9Y3C8 167 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 TRAV12-1A0A0B4J245 112 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 EBI3Q14213 229 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 PSMG3-AS1Q96PY0 264 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 CITED1Q99966 193 aa17.1■□□□□ 0.33
CAPN12-212ENST00000601953 IGLV11-55A0A075B6I3 123 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 LINC01549A6NIU2 74 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 B5MCH6 92 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 ZFP36P26651 326 aaKnown RBP17.09■□□□□ 0.33
CAPN12-212ENST00000601953 DYNAPQ8N1N2 210 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 PTH2Q96A98 100 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 RNF125Q96EQ8 232 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 FANCD2OSQ96PS1 177 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 F8VRH5 84 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 H7C1H1 209 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 SRD5A1P18405 259 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 FAM110AQ9BQ89 295 aa17.09■□□□□ 0.33
CAPN12-212ENST00000601953 LGALS1P09382 135 aaKnown RBP17.08■□□□□ 0.33
CAPN12-212ENST00000601953 GATA1P15976 413 aaPredicted RBP17.08■□□□□ 0.33
CAPN12-212ENST00000601953 ZNF80P51504 273 aaPredicted RBP17.08■□□□□ 0.33
CAPN12-212ENST00000601953 LOC107984156A0A0G2JMH3 177 aa17.08■□□□□ 0.32
CAPN12-212ENST00000601953 ARL17AQ8IVW1 177 aa17.08■□□□□ 0.32
CAPN12-212ENST00000601953 TACC2O95359 2948 aa17.07■□□□□ 0.32
CAPN12-212ENST00000601953 NHLRC4P0CG21 123 aaPredicted RBP17.07■□□□□ 0.32
CAPN12-212ENST00000601953 TRBV20-1A0A075B6N2 111 aa17.07■□□□□ 0.32
CAPN12-212ENST00000601953 IGKV2-40A0A087WW87 121 aaPredicted RBP17.07■□□□□ 0.32
CAPN12-212ENST00000601953 IGKV2D-40P01614 121 aaPredicted RBP17.07■□□□□ 0.32
CAPN12-212ENST00000601953 ZFP2Q6ZN57 461 aa17.07■□□□□ 0.32
CAPN12-212ENST00000601953 SIRPDQ9H106 197 aa17.07■□□□□ 0.32
CAPN12-212ENST00000601953 COL6A6A6NMZ7 2263 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 MFAP4P55083 255 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 NDPQ00604 133 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 TRBV7-9A0A0J9YWB2 115 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 A8MWV9 139 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 LY6DQ14210 128 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 TMEM78Q5T7P6 136 aa17.06■□□□□ 0.32
CAPN12-212ENST00000601953 RHODO00212 210 aa17.05■□□□□ 0.32
CAPN12-212ENST00000601953 SPTBN4Q9H254 2564 aa17.05■□□□□ 0.32
CAPN12-212ENST00000601953 ORM1P02763 201 aa17.04■□□□□ 0.32
CAPN12-212ENST00000601953 F8W735 103 aaPredicted RBP17.03■□□□□ 0.32
CAPN12-212ENST00000601953 SHISA2Q6UWI4 295 aa17.03■□□□□ 0.32
CAPN12-212ENST00000601953 HIVEP3Q5T1R4 2406 aa17.03■□□□□ 0.32
CAPN12-212ENST00000601953 EFNA4P52798 201 aa17.03■□□□□ 0.32
CAPN12-212ENST00000601953 PRORYQ9H606 182 aa17.03■□□□□ 0.32
CAPN12-212ENST00000601953 SPTBN1Q01082 2364 aaKnown RBP17.03■□□□□ 0.32
CAPN12-212ENST00000601953 FABP5P3A8MUU1 101 aa17.02■□□□□ 0.32
CAPN12-212ENST00000601953 NRACQ8N912 160 aa17.02■□□□□ 0.32
CAPN12-212ENST00000601953 S4R3C0 116 aa17.02■□□□□ 0.32
CAPN12-212ENST00000601953 CD7P09564 240 aa17.02■□□□□ 0.31
CAPN12-212ENST00000601953 Q8TAT8 98 aa17.02■□□□□ 0.31
CAPN12-212ENST00000601953 UBTD1Q9HAC8 227 aa17.02■□□□□ 0.31
CAPN12-212ENST00000601953 C21orf62Q9NYP8 219 aa17.02■□□□□ 0.31
CAPN12-212ENST00000601953 LINC01548A6NM66 108 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 IL17RELQ6ZVW7 336 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE12JA6NER3 117 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE7O76087 117 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 TCL1BO95988 128 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE12FP0CL80 117 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE12GP0CL81 117 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE12IP0CL82 117 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 ASIPP42127 132 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE4Q13068 117 aa17.01■□□□□ 0.31
CAPN12-212ENST00000601953 ANKRD29Q8N6D5 301 aa17■□□□□ 0.31
CAPN12-212ENST00000601953 ITLN2Q8WWU7 325 aaPredicted RBP17■□□□□ 0.31
CAPN12-212ENST00000601953 M0QXV9 152 aa17■□□□□ 0.31
CAPN12-212ENST00000601953 UBE2E1P51965 193 aa17■□□□□ 0.31
CAPN12-212ENST00000601953 NDUFV3P56181 108 aaKnown RBP17■□□□□ 0.31
CAPN12-212ENST00000601953 IGHV7-81A0A0B4J1V7 117 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE2BQ13066 116 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 SRSF9Q13242 221 aaKnown RBP eCLIP16.99■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE2EQ4V326 116 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 SFTA2Q6UW10 78 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 NDUFA11Q86Y39 141 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 Q8N9W7 124 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 AJUBAQ96IF1 538 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 GAGE2DQ9UEU5 116 aa16.99■□□□□ 0.31
CAPN12-212ENST00000601953 HERV-K104P63124 156 aa16.98■□□□□ 0.31
CAPN12-212ENST00000601953 KIR2DL4Q99706 377 aa16.98■□□□□ 0.31
CAPN12-212ENST00000601953 PRADC1Q9BSG0 188 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms