RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 APOC3P02656 99 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 IBA57Q5T440 356 aaKnown RBP10.5□□□□□ -0.73
USE1-210ENST00000601662 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 FAM159AQ6UWV7 190 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 CSNK1G2-AS1Q8NCQ2 148 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 XKRY2A2RUG3 117 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 PPP1R2P9O14990 202 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 SNAPINO95295 136 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 ORM1P02763 201 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 MT-ND4LP03901 98 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
USE1-210ENST00000601662 NUDT10Q8NFP7 164 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 OR10G8Q8NGN5 311 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 ANAPC16Q96DE5 110 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 NUDT11Q96G61 164 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 SFRP2Q96HF1 295 aa10.49□□□□□ -0.73
USE1-210ENST00000601662 IGHV1OR15-1A0A075B7D0 117 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 C3orf84H3BNL1 204 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 GATCO43716 136 aaKnown RBP10.48□□□□□ -0.73
USE1-210ENST00000601662 S100A1P23297 94 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 TDRG1Q3Y452 100 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 RNASE7Q9H1E1 156 aaKnown RBP10.48□□□□□ -0.73
USE1-210ENST00000601662 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
USE1-210ENST00000601662 SMIM9A6NGZ8 99 aa10.47□□□□□ -0.73
USE1-210ENST00000601662 ZNF705GA8MUZ8 300 aaPredicted RBP10.47□□□□□ -0.73
USE1-210ENST00000601662 RHEBQ15382 184 aa10.47□□□□□ -0.73
USE1-210ENST00000601662 ZNF705AQ6ZN79 300 aaPredicted RBP10.47□□□□□ -0.73
USE1-210ENST00000601662 CLRN3Q8NCR9 226 aa10.47□□□□□ -0.73
USE1-210ENST00000601662 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
USE1-210ENST00000601662 RNF183Q96D59 192 aa10.47□□□□□ -0.73
USE1-210ENST00000601662 RPP21Q9H633 154 aaKnown RBP10.47□□□□□ -0.73
USE1-210ENST00000601662 NAGKQ9UJ70 344 aa10.47□□□□□ -0.73
USE1-210ENST00000601662 IGHV3OR16-12A0A075B7B8 117 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 A8MWL6 223 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
USE1-210ENST00000601662 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
USE1-210ENST00000601662 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 CT83Q5H943 113 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 MUC21Q5SSG8 566 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 NEU1Q99519 415 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 CTDSP1Q9GZU7 261 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 DNAH7Q8WXX0 4024 aa10.46□□□□□ -0.73
USE1-210ENST00000601662 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 IGKV3D-20A0A0C4DH25 116 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 CBY3A6NI87 242 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 CXCL1P09341 107 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 RNF212Q495C1 297 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 Q6ZQT7 251 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 ZNF493Q6ZR52 646 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
USE1-210ENST00000601662 A0A087WWC5 75 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 A0A0J9YWU9 116 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 C7orf77A4D0Y5 90 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 HTN1P15515 57 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 RRN3P1Q2M238 152 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 DNLZQ5SXM8 178 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 TMEM242Q9NWH2 141 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 V9GYV3 84 aa10.44□□□□□ -0.74
USE1-210ENST00000601662 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 ATP6V1G1O75348 118 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 S100A4P26447 101 aaKnown RBP10.43□□□□□ -0.74
USE1-210ENST00000601662 ASIPP42127 132 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 GFRA4Q9GZZ7 299 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
USE1-210ENST00000601662 TMSB15BA0A087X1C1 80 aa10.42□□□□□ -0.74
USE1-210ENST00000601662 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
USE1-210ENST00000601662 GNRH2O43555 120 aa10.42□□□□□ -0.74
USE1-210ENST00000601662 MIFP14174 115 aa10.42□□□□□ -0.74
USE1-210ENST00000601662 TMEM263Q8WUH6 116 aaKnown RBP10.42□□□□□ -0.74
USE1-210ENST00000601662 C16orf74Q96GX8 76 aa10.42□□□□□ -0.74
USE1-210ENST00000601662 TP53TG3Q9ULZ0 132 aa10.42□□□□□ -0.74
USE1-210ENST00000601662 F2Z2F3 143 aa10.41□□□□□ -0.74
USE1-210ENST00000601662 TYMSP04818 313 aa10.41□□□□□ -0.74
USE1-210ENST00000601662 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
USE1-210ENST00000601662 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
USE1-210ENST00000601662 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
USE1-210ENST00000601662 IL17DQ8TAD2 202 aa10.41□□□□□ -0.74
USE1-210ENST00000601662 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
USE1-210ENST00000601662 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 GRIFINA4D1Z8 144 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 DEFB4AO15263 64 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
USE1-210ENST00000601662 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 SPXQ9BT56 116 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 IL36BQ9NZH7 164 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 X6R8D5 127 aa10.4□□□□□ -0.74
USE1-210ENST00000601662 SMIM27A0A1W2PRY6 76 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 CXorf65A6NEN9 183 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 OR5AL1P0C617 328 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 AZU1P20160 251 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 S100PP25815 95 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms