RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 BTN1A1Q13410 526 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 IQCF2Q8IXL9 164 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 LHFPL5Q8TAF8 219 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 RAB2BQ8WUD1 216 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 DNAJC30Q96LL9 226 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 SHANK2-AS3Q9BTD1 123 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 VCX3AQ9NNX9 186 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 U3KQ87 197 aa4.3□□□□□ -1.72
LINC00343-209ENST00000601607 C7orf71A4D174 169 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 CRYM-AS1A6NIL9 109 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 CFDP00746 253 aaPredicted RBP4.29□□□□□ -1.72
LINC00343-209ENST00000601607 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 IBA57Q5T440 356 aaKnown RBP4.29□□□□□ -1.72
LINC00343-209ENST00000601607 DAZ4Q86SG3 579 aaKnown RBP4.29□□□□□ -1.72
LINC00343-209ENST00000601607 BPIFCQ8NFQ6 507 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 OR10P1Q8NGE3 313 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 ODF3Q96PU9 254 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 FUNDC2Q9BWH2 189 aa4.29□□□□□ -1.72
LINC00343-209ENST00000601607 ZNF331Q9NQX6 463 aaPredicted RBP4.29□□□□□ -1.72
LINC00343-209ENST00000601607 DAZ3Q9NR90 486 aaKnown RBP4.29□□□□□ -1.72
LINC00343-209ENST00000601607 IGKV2D-24A0A075B6R9 120 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 C5orf52A6NGY3 159 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 H3BMQ9 156 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 H3BTX0 84 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 SLC17A3O00476 420 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
LINC00343-209ENST00000601607 SLC25A5P05141 298 aaKnown RBP4.28□□□□□ -1.72
LINC00343-209ENST00000601607 MXD1Q05195 221 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 MUC21Q5SSG8 566 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 GPR107Q5VW38 600 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 Q6ZQT7 251 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 OR10G4Q8NGN3 311 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 DTD1Q8TEA8 209 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 TXNL4BQ9NX01 149 aaKnown RBP4.28□□□□□ -1.72
LINC00343-209ENST00000601607 COPZ2Q9P299 210 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 SSR3Q9UNL2 185 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 HIGD1AQ9Y241 93 aa4.28□□□□□ -1.72
LINC00343-209ENST00000601607 TRAV8-1A0A0A6YYK1 113 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 MPDU1O75352 247 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 CDS2O95674 445 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 S100A7P31151 101 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 RNASE4P34096 147 aaKnown RBP4.27□□□□□ -1.73
LINC00343-209ENST00000601607 SDC2P34741 201 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 LCN15Q6UWW0 184 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 SELENOHQ8IZQ5 122 aaKnown RBP4.27□□□□□ -1.73
LINC00343-209ENST00000601607 OR1S1Q8NH92 325 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 DYNC2LI1Q8TCX1 351 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 TMEM222Q9H0R3 208 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 RBKSQ9H477 322 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 CCDC59Q9P031 241 aaKnown RBP4.27□□□□□ -1.73
LINC00343-209ENST00000601607 RSL24D1Q9UHA3 163 aaKnown RBP4.27□□□□□ -1.73
LINC00343-209ENST00000601607 PAIP2BQ9ULR5 123 aaKnown RBP4.27□□□□□ -1.73
LINC00343-209ENST00000601607 KIF25-AS1Q9Y6Z4 181 aa4.27□□□□□ -1.73
LINC00343-209ENST00000601607 IGHV1OR15-1A0A075B7D0 117 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 GGTLC3B5MD39 225 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 PFN1P07737 140 aaKnown RBP4.26□□□□□ -1.73
LINC00343-209ENST00000601607 OR5G3P0C626 314 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 SULT1A3P0DMM9 295 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 SULT1A4P0DMN0 295 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 CXCL2P19875 107 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 PRSS3P35030 304 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 ERCC8Q13216 396 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 NEDD8Q15843 81 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 ZNF506Q5JVG8 444 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 PRR9Q5T870 116 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 ACOT7LQ6ZUV0 252 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 LHFPL1Q86WI0 220 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 GPX8Q8TED1 209 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 GLYATL2Q8WU03 294 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 RMI2Q96E14 147 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 SLC50A1Q9BRV3 221 aa4.26□□□□□ -1.73
LINC00343-209ENST00000601607 SLIRPQ9GZT3 109 aaKnown RBP4.26□□□□□ -1.73
LINC00343-209ENST00000601607 NAA50Q9GZZ1 169 aaKnown RBP4.26□□□□□ -1.73
LINC00343-209ENST00000601607 TRAV4A0A0B4J268 109 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 HYPMO75409 117 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 OR4E1P0C645 316 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 ATP5IP56385 69 aaPredicted RBP4.25□□□□□ -1.73
LINC00343-209ENST00000601607 AKR1C1Q04828 323 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 CCDC71LQ8N9Z2 235 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 OR4C5Q8NGB2 326 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 OR13C8Q8NGS7 320 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 S100A16Q96FQ6 103 aaKnown RBP4.25□□□□□ -1.73
LINC00343-209ENST00000601607 ZC2HC1AQ96GY0 325 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 GTSF1LQ9H1H1 148 aa4.25□□□□□ -1.73
LINC00343-209ENST00000601607 FABP12A6NFH5 140 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 PITX3O75364 302 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 B3GALNT1O75752 331 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 IL5P05113 134 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 LINC00869P0C866 280 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 IAPPP10997 89 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 RAB11AP62491 216 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
LINC00343-209ENST00000601607 SPCS2Q15005 226 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 CNPY1Q3B7I2 92 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 SDIM1Q6ZPB5 146 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 CYP2G1PQ6ZSU1 146 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 CLVS1Q8IUQ0 354 aaPredicted RBP4.24□□□□□ -1.73
LINC00343-209ENST00000601607 C9orf163Q8N9P6 203 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 UBE2WQ96B02 151 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 FAM19A4Q96LR4 140 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms