RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 HIST1H1EP10412 219 aaKnown RBP7.99□□□□□ -1.13
HIF3A-217ENST00000600236 CBLN2Q8IUK8 224 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 IQCF2Q8IXL9 164 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 A0A0J9YY99 117 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 C7orf71A4D174 169 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 H3BNG1 76 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 M0R036 132 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 DAZ2Q13117 558 aaKnown RBP7.98□□□□□ -1.13
HIF3A-217ENST00000600236 ZNF575Q86XF7 245 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 SLC25A2Q9BXI2 301 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 Q9H8V8 135 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 SDF2L1Q9HCN8 221 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 NAT8Q9UHE5 227 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 HECTD4Q9Y4D8 3996 aa7.98□□□□□ -1.13
HIF3A-217ENST00000600236 TRGV2A0A075B6R0 118 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 A0A1W2PRE2 83 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 ZNF727A8MUV8 499 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 C16orf90A8MZG2 172 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 M0R3E3 92 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 TNP2Q05952 138 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 C15orf54Q8N8G6 183 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 BLNKQ8WV28 456 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 PARLQ9H300 379 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 RPS10P5Q9NQ39 176 aa7.97□□□□□ -1.13
HIF3A-217ENST00000600236 KLLNB2CW77 178 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 GPX1P07203 203 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 CEBPGP53567 150 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 UBE2G2P60604 165 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 TMEM78Q5T7P6 136 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.96□□□□□ -1.14
HIF3A-217ENST00000600236 YPEL4Q96NS1 127 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 TCEAL7Q9BRU2 100 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 UPK3BQ9BT76 320 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 TMEM242Q9NWH2 141 aa7.96□□□□□ -1.14
HIF3A-217ENST00000600236 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 FAT2Q9NYQ8 4349 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 A0A1W2PPQ1 181 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 OR7C2O60412 319 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 PYYP10082 97 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 BTF3P20290 206 aaKnown RBP7.95□□□□□ -1.14
HIF3A-217ENST00000600236 HOXA5P20719 270 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 ERCC8Q13216 396 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 TMEM241Q24JQ0 296 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 CST9LP1Q5W188 147 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 Q6ZTI0 123 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 C18orf15Q96N68 181 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 CTDSP1Q9GZU7 261 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 AGPAT4-IT1Q9H0P7 198 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 GSN-AS1Q9NRJ2 163 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 MRPS16Q9Y3D3 137 aaKnown RBP7.95□□□□□ -1.14
HIF3A-217ENST00000600236 DNAH2Q9P225 4427 aa7.95□□□□□ -1.14
HIF3A-217ENST00000600236 TRGV1A0A0A0MS02 117 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 COLCA2A8K830 154 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 GGTLC3B5MD39 225 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 C9JCJ5 164 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 NDUFB4O95168 129 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 CRISP2P16562 243 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
HIF3A-217ENST00000600236 UBE2L3P68036 154 aaKnown RBP7.94□□□□□ -1.14
HIF3A-217ENST00000600236 IBA57Q5T440 356 aaKnown RBP7.94□□□□□ -1.14
HIF3A-217ENST00000600236 C9orf47Q6ZRZ4 202 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 EXOC3-AS1Q8N2X6 119 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 FXYD5Q96DB9 178 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 FAM19A4Q96LR4 140 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 PAXXQ9BUH6 204 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 OR51M1Q9H341 326 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 Q9H3A6 140 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 TMA7Q9Y2S6 64 aaKnown RBP7.94□□□□□ -1.14
HIF3A-217ENST00000600236 LY96Q9Y6Y9 160 aa7.94□□□□□ -1.14
HIF3A-217ENST00000600236 DNAH11Q96DT5 4516 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 SCO2A0A1W2PP80 73 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
HIF3A-217ENST00000600236 MT-ND4LP03901 98 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 AKR1C3P42330 323 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 CSN1S1P47710 185 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 TCL1AP56279 114 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 RPL23P62829 140 aaKnown RBP7.93□□□□□ -1.14
HIF3A-217ENST00000600236 ESRGQ1W209 222 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 C11orf72Q8NBR9 251 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 HIST1H2BAQ96A08 127 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 ZNF492Q9P255 531 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
HIF3A-217ENST00000600236 IGHV1OR15-1A0A075B7D0 117 aa7.92□□□□□ -1.14
HIF3A-217ENST00000600236 IGKV2-40A0A087WW87 121 aaPredicted RBP7.92□□□□□ -1.14
HIF3A-217ENST00000600236 TRBV7-9A0A0J9YWB2 115 aa7.92□□□□□ -1.14
HIF3A-217ENST00000600236 SPINK4O60575 86 aa7.92□□□□□ -1.14
HIF3A-217ENST00000600236 CDK2AP2O75956 126 aa7.92□□□□□ -1.14
HIF3A-217ENST00000600236 IGKV2D-40P01614 121 aaPredicted RBP7.92□□□□□ -1.14
HIF3A-217ENST00000600236 SLAQ13239 276 aa7.92□□□□□ -1.14
HIF3A-217ENST00000600236 ZNF674Q2M3X9 581 aa7.92□□□□□ -1.14
HIF3A-217ENST00000600236 TRBV20OR9-2A0A075B6H5 130 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 OR10J4P0C629 311 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 ZNF138P52744 262 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 ZNF415Q09FC8 603 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 ADIRFQ15847 76 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms