RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 SGK494Q96LW2 274 aa13.26□□□□□ -0.29
FARP1-229ENST00000600190 KRTAP4-5Q9BYR2 181 aa13.26□□□□□ -0.29
FARP1-229ENST00000600190 GNG13Q9P2W3 67 aa13.26□□□□□ -0.29
FARP1-229ENST00000600190 TRAV8-1A0A0A6YYK1 113 aa13.25□□□□□ -0.29
FARP1-229ENST00000600190 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
FARP1-229ENST00000600190 S100A9P06702 114 aaKnown RBP13.25□□□□□ -0.29
FARP1-229ENST00000600190 FAM3BP58499 235 aaPredicted RBP13.25□□□□□ -0.29
FARP1-229ENST00000600190 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
FARP1-229ENST00000600190 ZFAND2AQ8N6M9 145 aa13.25□□□□□ -0.29
FARP1-229ENST00000600190 TIMM8BQ9Y5J9 83 aaPredicted RBP13.25□□□□□ -0.29
FARP1-229ENST00000600190 TRAV21A0A0B4J279 112 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 F5H768 121 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 ZNF324O75467 553 aaPredicted RBP13.24□□□□□ -0.29
FARP1-229ENST00000600190 NUDT3O95989 172 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 TAGLN2P37802 199 aaKnown RBP13.24□□□□□ -0.29
FARP1-229ENST00000600190 AKR1C3P42330 323 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 SMUG1Q53HV7 270 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 ZNF680Q8NEM1 530 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 FMC1Q96HJ9 113 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
FARP1-229ENST00000600190 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
FARP1-229ENST00000600190 AZU1P20160 251 aa13.23□□□□□ -0.29
FARP1-229ENST00000600190 TNP2Q05952 138 aa13.23□□□□□ -0.29
FARP1-229ENST00000600190 ZFP30Q9Y2G7 519 aa13.23□□□□□ -0.29
FARP1-229ENST00000600190 C16orf90A8MZG2 172 aa13.22□□□□□ -0.29
FARP1-229ENST00000600190 ATP5G3P48201 142 aa13.22□□□□□ -0.29
FARP1-229ENST00000600190 Q6AWC8 147 aa13.22□□□□□ -0.29
FARP1-229ENST00000600190 KCNS1Q96KK3 526 aa13.22□□□□□ -0.29
FARP1-229ENST00000600190 LINC00467Q9BRT7 94 aa13.22□□□□□ -0.29
FARP1-229ENST00000600190 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
FARP1-229ENST00000600190 TRAV34A0A0B4J273 112 aa13.21□□□□□ -0.29
FARP1-229ENST00000600190 NBDYA0A0U1RRE5 68 aa13.21□□□□□ -0.29
FARP1-229ENST00000600190 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
FARP1-229ENST00000600190 GCGP01275 180 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 ATP5G1P05496 136 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 CCL20P78556 96 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 C6orf223Q8N319 242 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 NAGKQ9UJ70 344 aa13.2□□□□□ -0.3
FARP1-229ENST00000600190 TRGV11A0A075B6L2 103 aa13.19□□□□□ -0.3
FARP1-229ENST00000600190 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
FARP1-229ENST00000600190 PDE6DO43924 150 aa13.19□□□□□ -0.3
FARP1-229ENST00000600190 CCL18P55774 89 aa13.19□□□□□ -0.3
FARP1-229ENST00000600190 MUC21Q5SSG8 566 aa13.19□□□□□ -0.3
FARP1-229ENST00000600190 PRR9Q5T870 116 aa13.19□□□□□ -0.3
FARP1-229ENST00000600190 RNASE8Q8TDE3 154 aaKnown RBP13.19□□□□□ -0.3
FARP1-229ENST00000600190 NOP10Q9NPE3 64 aaKnown RBP13.19□□□□□ -0.3
FARP1-229ENST00000600190 FABP5P3A8MUU1 101 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 IGLV2-11P01706 119 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 ZNF415Q09FC8 603 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 TMEM183BQ1AE95 376 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 IBA57Q5T440 356 aaKnown RBP13.18□□□□□ -0.3
FARP1-229ENST00000600190 TVP23CQ96ET8 276 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 VAX2Q9UIW0 290 aa13.18□□□□□ -0.3
FARP1-229ENST00000600190 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
FARP1-229ENST00000600190 MEF2BQ02080 365 aaPredicted RBP13.17□□□□□ -0.3
FARP1-229ENST00000600190 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
FARP1-229ENST00000600190 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
FARP1-229ENST00000600190 TRBV6-1A0A0K0K1D8 114 aa13.16□□□□□ -0.3
FARP1-229ENST00000600190 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
FARP1-229ENST00000600190 Q86TA4 180 aa13.16□□□□□ -0.3
FARP1-229ENST00000600190 CDK2AP2O75956 126 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 BCL2P10415 239 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 DAZ2Q13117 558 aaKnown RBP13.15□□□□□ -0.3
FARP1-229ENST00000600190 TEX261Q6UWH6 196 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 BAGE2Q86Y30 109 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 TMEM183AQ8IXX5 376 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 MAPKAPK5-AS1Q8N8E1 139 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 GSN-AS1Q9NRJ2 163 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
FARP1-229ENST00000600190 TDRG1Q3Y452 100 aa13.14□□□□□ -0.31
FARP1-229ENST00000600190 SPXQ9BT56 116 aa13.14□□□□□ -0.31
FARP1-229ENST00000600190 EIF5A2Q9GZV4 153 aaKnown RBP13.14□□□□□ -0.31
FARP1-229ENST00000600190 RBFOX3A6NFN3 312 aa13.13□□□□□ -0.31
FARP1-229ENST00000600190 LTAP01374 205 aa13.13□□□□□ -0.31
FARP1-229ENST00000600190 TCL1AP56279 114 aa13.13□□□□□ -0.31
FARP1-229ENST00000600190 OR5I1Q13606 314 aa13.13□□□□□ -0.31
FARP1-229ENST00000600190 TP53TG3Q9ULZ0 132 aa13.13□□□□□ -0.31
FARP1-229ENST00000600190 APOBP04114 4563 aaKnown RBP13.13□□□□□ -0.31
FARP1-229ENST00000600190 TRGV2A0A075B6R0 118 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 GAGE12BA1L429 117 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 GAGE7O76087 117 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 ORM1P02763 201 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 GAGE12FP0CL80 117 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 GAGE12GP0CL81 117 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 GAGE12IP0CL82 117 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 S100A4P26447 101 aaKnown RBP13.12□□□□□ -0.31
FARP1-229ENST00000600190 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 Q6ZQT7 251 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 Q9H8V8 135 aa13.12□□□□□ -0.31
FARP1-229ENST00000600190 DNAH5Q8TE73 4624 aa13.11□□□□□ -0.31
FARP1-229ENST00000600190 RPL35P42766 123 aaKnown RBP13.11□□□□□ -0.31
FARP1-229ENST00000600190 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
FARP1-229ENST00000600190 LYPD6BQ8NI32 183 aa13.11□□□□□ -0.31
FARP1-229ENST00000600190 C11orf52Q96A22 123 aa13.11□□□□□ -0.31
FARP1-229ENST00000600190 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms