RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LOC100131303A0A0U1RQF7 123 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 PFN1P07737 140 aaKnown RBP14.18□□□□□ -0.14
PNKP-212ENST00000599454 FAM74A1Q5RGS3 127 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 Q8N814 137 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 ATP5SQ99766 215 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 OTORQ9NRC9 128 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 GNRH2O43555 120 aa14.17□□□□□ -0.14
PNKP-212ENST00000599454 CIDEAO60543 219 aa14.17□□□□□ -0.14
PNKP-212ENST00000599454 CYCSP99999 105 aaKnown RBP14.17□□□□□ -0.14
PNKP-212ENST00000599454 FFAR4Q5NUL3 377 aa14.17□□□□□ -0.14
PNKP-212ENST00000599454 KCNS1Q96KK3 526 aa14.17□□□□□ -0.14
PNKP-212ENST00000599454 HYLS1Q96M11 299 aa14.17□□□□□ -0.14
PNKP-212ENST00000599454 SDF2L1Q9HCN8 221 aa14.17□□□□□ -0.14
PNKP-212ENST00000599454 FBLL1A6NHQ2 334 aaKnown RBP14.16□□□□□ -0.14
PNKP-212ENST00000599454 C1QBP02746 253 aa14.16□□□□□ -0.14
PNKP-212ENST00000599454 TYMSP04818 313 aa14.16□□□□□ -0.14
PNKP-212ENST00000599454 HAMPP81172 84 aa14.16□□□□□ -0.14
PNKP-212ENST00000599454 LRRC37A5PQ49AS3 106 aa14.16□□□□□ -0.14
PNKP-212ENST00000599454 H0YIZ8 118 aa14.15□□□□□ -0.14
PNKP-212ENST00000599454 SIX6O95475 246 aa14.15□□□□□ -0.14
PNKP-212ENST00000599454 PRADC1Q9BSG0 188 aa14.15□□□□□ -0.14
PNKP-212ENST00000599454 PGPA6NDG6 321 aa14.14□□□□□ -0.15
PNKP-212ENST00000599454 OR10J3Q5JRS4 329 aa14.14□□□□□ -0.15
PNKP-212ENST00000599454 TREM1Q9NP99 234 aa14.14□□□□□ -0.15
PNKP-212ENST00000599454 NDUFA13Q9P0J0 144 aa14.14□□□□□ -0.15
PNKP-212ENST00000599454 MBD2Q9UBB5 411 aa14.14□□□□□ -0.15
PNKP-212ENST00000599454 RPH3ALQ9UNE2 315 aa14.14□□□□□ -0.15
PNKP-212ENST00000599454 TRBV6-4A0A1B0GX49 114 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 ASAH1Q13510 395 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 LAGE3Q14657 143 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 RHOHQ15669 191 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 GOLT1AQ6ZVE7 132 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 SCGB1C1Q8TD33 95 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 ASB13Q8WXK3 278 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 Q9HAA7 133 aa14.13□□□□□ -0.15
PNKP-212ENST00000599454 J3QL48 77 aa14.12□□□□□ -0.15
PNKP-212ENST00000599454 LELP1Q5T871 98 aa14.12□□□□□ -0.15
PNKP-212ENST00000599454 PQLC2Q6ZP29 291 aa14.12□□□□□ -0.15
PNKP-212ENST00000599454 TM2D2Q9BX73 214 aa14.12□□□□□ -0.15
PNKP-212ENST00000599454 HSPB11Q9Y547 144 aa14.12□□□□□ -0.15
PNKP-212ENST00000599454 F6UZH7 168 aa14.11□□□□□ -0.15
PNKP-212ENST00000599454 ENKURQ8TC29 256 aa14.11□□□□□ -0.15
PNKP-212ENST00000599454 RS1O15537 224 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 PET100P0DJ07 73 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 ZNF876PQ49A33 203 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 LINC00299Q6ZSB3 139 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 TVP23CQ96ET8 276 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 NDFIP1Q9BT67 221 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 SH3BGRL3Q9H299 93 aa14.1□□□□□ -0.15
PNKP-212ENST00000599454 IGHV3-30P01768 117 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 PLA2G1BP04054 148 aaKnown RBP14.09□□□□□ -0.15
PNKP-212ENST00000599454 IGHV3-30-3P0DP02 117 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 IGHV3-30-5P0DP03 117 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 ACOT6Q3I5F7 207 aaPredicted RBP14.09□□□□□ -0.15
PNKP-212ENST00000599454 CFAP126Q5VTH2 177 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 PPP1R1CQ8WVI7 109 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 GTSF1LQ9H1H1 148 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 FAM30AQ9NZY2 134 aa14.09□□□□□ -0.15
PNKP-212ENST00000599454 TRAV8-1A0A0A6YYK1 113 aa14.08□□□□□ -0.16
PNKP-212ENST00000599454 SERTM2A0A1B0GWG4 89 aa14.08□□□□□ -0.16
PNKP-212ENST00000599454 A0A1W2PPV4 95 aa14.08□□□□□ -0.16
PNKP-212ENST00000599454 PTH2Q96A98 100 aa14.08□□□□□ -0.16
PNKP-212ENST00000599454 MGST1P10620 155 aaKnown RBP14.07□□□□□ -0.16
PNKP-212ENST00000599454 ATP6V0E2Q8NHE4 81 aa14.07□□□□□ -0.16
PNKP-212ENST00000599454 S100ZQ8WXG8 99 aa14.07□□□□□ -0.16
PNKP-212ENST00000599454 DNAH8Q96JB1 4490 aa14.07□□□□□ -0.16
PNKP-212ENST00000599454 MPC2O95563 127 aa14.06□□□□□ -0.16
PNKP-212ENST00000599454 RPL12P30050 165 aaKnown RBP14.06□□□□□ -0.16
PNKP-212ENST00000599454 H2BFSP57053 126 aa14.06□□□□□ -0.16
PNKP-212ENST00000599454 Q6ZSA8 131 aa14.06□□□□□ -0.16
PNKP-212ENST00000599454 C9orf85Q96MD7 179 aa14.06□□□□□ -0.16
PNKP-212ENST00000599454 SMIM3Q9BZL3 60 aa14.06□□□□□ -0.16
PNKP-212ENST00000599454 TAAR5O14804 337 aa14.05□□□□□ -0.16
PNKP-212ENST00000599454 EIF3GO75821 320 aaKnown RBP eCLIP14.05□□□□□ -0.16
PNKP-212ENST00000599454 GNG5P63218 68 aa14.05□□□□□ -0.16
PNKP-212ENST00000599454 DPPA3Q6W0C5 159 aa14.05□□□□□ -0.16
PNKP-212ENST00000599454 TRAV8-3A0A0A6YYJ7 113 aa14.04□□□□□ -0.16
PNKP-212ENST00000599454 IGHV3-73A0A0B4J1V6 119 aa14.03□□□□□ -0.16
PNKP-212ENST00000599454 KRTAP29-1A8MX34 341 aaPredicted RBP14.03□□□□□ -0.16
PNKP-212ENST00000599454 INMT-MINDY4F8WBC2 141 aa14.03□□□□□ -0.16
PNKP-212ENST00000599454 K7EQM0 130 aa14.03□□□□□ -0.16
PNKP-212ENST00000599454 TOR2AQ5JU69 321 aa14.03□□□□□ -0.16
PNKP-212ENST00000599454 C5orf17Q8NAS9 161 aa14.03□□□□□ -0.16
PNKP-212ENST00000599454 ZNF80P51504 273 aaPredicted RBP14.02□□□□□ -0.17
PNKP-212ENST00000599454 RAB2AP61019 212 aa14.02□□□□□ -0.17
PNKP-212ENST00000599454 ZNF506Q5JVG8 444 aa14.02□□□□□ -0.17
PNKP-212ENST00000599454 C11orf21Q9P2W6 132 aa14.02□□□□□ -0.17
PNKP-212ENST00000599454 PGPEP1LA6NFU8 196 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 GCGP01275 180 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 TCRAP04437 139 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 WFDC2Q14508 124 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 ZFP69Q49AA0 526 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 LINC00528Q8N1L1 170 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 OR10G9Q8NGN4 311 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 OR10G7Q8NGN6 311 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 DEFB104AQ8WTQ1 72 aa14.01□□□□□ -0.17
PNKP-212ENST00000599454 SGK494Q96LW2 274 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms