RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RNF212Q495C1 297 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 IQCF2Q8IXL9 164 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 PTH2Q96A98 100 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 ZFP30Q9Y2G7 519 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 TRGV11A0A075B6L2 103 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 PAGE4O60829 102 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 IFNA7P01567 189 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
USHBP1-209ENST00000598570 hCG_2014768A0A024R1R8 64 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 F5H768 121 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 F6UZH7 168 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 GNRH2O43555 120 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 HTN3P15516 51 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 CCL20P78556 96 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 TMEM183BQ1AE95 376 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 PRNTQ86SH4 94 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 Q86TA4 180 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 FMC1Q96HJ9 113 aa12.32□□□□□ -0.44
USHBP1-209ENST00000598570 GCGP01275 180 aa12.31□□□□□ -0.44
USHBP1-209ENST00000598570 LTAP01374 205 aa12.31□□□□□ -0.44
USHBP1-209ENST00000598570 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
USHBP1-209ENST00000598570 CRIP1P50238 77 aa12.31□□□□□ -0.44
USHBP1-209ENST00000598570 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-209ENST00000598570 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
USHBP1-209ENST00000598570 TMEM183AQ8IXX5 376 aa12.31□□□□□ -0.44
USHBP1-209ENST00000598570 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 TYMSP04818 313 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 ZFP69Q49AA0 526 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 TXNDC17Q9BRA2 123 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 MLST8Q9BVC4 326 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 SDF2L1Q9HCN8 221 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
USHBP1-209ENST00000598570 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
USHBP1-209ENST00000598570 CST9LP1Q5W188 147 aa12.29□□□□□ -0.44
USHBP1-209ENST00000598570 C11orf52Q96A22 123 aa12.29□□□□□ -0.44
USHBP1-209ENST00000598570 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
USHBP1-209ENST00000598570 IGKV3D-20A0A0C4DH25 116 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 M0R2P5 195 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 FHL2Q14192 279 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 ZNF674Q2M3X9 581 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 LYPD6BQ8NI32 183 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 ZC2HC1AQ96GY0 325 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 MANBALQ9NQG1 85 aa12.28□□□□□ -0.44
USHBP1-209ENST00000598570 TRGV2A0A075B6R0 118 aa12.27□□□□□ -0.45
USHBP1-209ENST00000598570 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
USHBP1-209ENST00000598570 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
USHBP1-209ENST00000598570 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
USHBP1-209ENST00000598570 SLAQ13239 276 aa12.26□□□□□ -0.45
USHBP1-209ENST00000598570 OR5I1Q13606 314 aa12.25□□□□□ -0.45
USHBP1-209ENST00000598570 Q6ZR54 194 aa12.25□□□□□ -0.45
USHBP1-209ENST00000598570 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
USHBP1-209ENST00000598570 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
USHBP1-209ENST00000598570 SCO2A0A1W2PP80 73 aa12.24□□□□□ -0.45
USHBP1-209ENST00000598570 KRBOX1C9JBD0 128 aa12.24□□□□□ -0.45
USHBP1-209ENST00000598570 TEX46H3BTG2 121 aa12.24□□□□□ -0.45
USHBP1-209ENST00000598570 CRYBA4P53673 196 aa12.24□□□□□ -0.45
USHBP1-209ENST00000598570 UBE2G1P62253 170 aa12.24□□□□□ -0.45
USHBP1-209ENST00000598570 PRO0255Q9UI72 69 aa12.24□□□□□ -0.45
USHBP1-209ENST00000598570 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 A0A1B0GV50 99 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 CIDEAO60543 219 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 AKR1C3P42330 323 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 FAM162BQ5T6X4 162 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 GNG13Q9P2W3 67 aa12.23□□□□□ -0.45
USHBP1-209ENST00000598570 EPPK1P58107 5090 aaKnown RBP12.22□□□□□ -0.45
USHBP1-209ENST00000598570 A0A096LPF7 62 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
USHBP1-209ENST00000598570 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 IL36BQ9NZH7 164 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 HHLA3Q9XRX5 114 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
USHBP1-209ENST00000598570 RS1O15537 224 aa12.21□□□□□ -0.45
USHBP1-209ENST00000598570 SH2D1AO60880 128 aa12.21□□□□□ -0.45
USHBP1-209ENST00000598570 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
USHBP1-209ENST00000598570 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
USHBP1-209ENST00000598570 FRAS1Q86XX4 4008 aa12.21□□□□□ -0.46
USHBP1-209ENST00000598570 PDE6DO43924 150 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 NUDT3O95989 172 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 CXCL1P09341 107 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 BCL2P10415 239 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 RPL35P42766 123 aaKnown RBP12.2□□□□□ -0.46
USHBP1-209ENST00000598570 ESRGQ1W209 222 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 BAGE2Q86Y30 109 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 SMIM12Q96EX1 92 aa12.2□□□□□ -0.46
USHBP1-209ENST00000598570 A0A0J9YY99 117 aa12.19□□□□□ -0.46
USHBP1-209ENST00000598570 PGPEP1LA6NFU8 196 aa12.19□□□□□ -0.46
USHBP1-209ENST00000598570 NDUFS6O75380 124 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms