RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 STARD9Q9P2P6 4700 aa14.43□□□□□ -0.1
PNKP-211ENST00000598020 NDUFS6O75380 124 aaKnown RBP14.43□□□□□ -0.1
PNKP-211ENST00000598020 CRIP1P50238 77 aa14.43□□□□□ -0.1
PNKP-211ENST00000598020 ZNF415Q09FC8 603 aa14.43□□□□□ -0.1
PNKP-211ENST00000598020 BAGE2Q86Y30 109 aa14.43□□□□□ -0.1
PNKP-211ENST00000598020 SDF2L1Q9HCN8 221 aa14.43□□□□□ -0.1
PNKP-211ENST00000598020 NAGKQ9UJ70 344 aa14.43□□□□□ -0.1
PNKP-211ENST00000598020 TYMSP04818 313 aa14.42□□□□□ -0.1
PNKP-211ENST00000598020 ZNF674Q2M3X9 581 aa14.42□□□□□ -0.1
PNKP-211ENST00000598020 FAM162BQ5T6X4 162 aa14.42□□□□□ -0.1
PNKP-211ENST00000598020 DERL1Q9BUN8 251 aa14.42□□□□□ -0.1
PNKP-211ENST00000598020 MED9Q9NWA0 146 aa14.42□□□□□ -0.1
PNKP-211ENST00000598020 MDFICQ9P1T7 246 aa14.42□□□□□ -0.1
PNKP-211ENST00000598020 DEFB131BA0A096LNP1 70 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 IGHV3-16A0A0C4DH30 117 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 GNRH2O43555 120 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 SPINK4O60575 86 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 DEFB130BP0DP73 79 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 DEFB130AP0DP74 79 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 LGALS9BQ3B8N2 356 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 FAM210AQ96ND0 272 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 SPXQ9BT56 116 aa14.41□□□□□ -0.1
PNKP-211ENST00000598020 TMEM250H0YL14 139 aa14.4□□□□□ -0.1
PNKP-211ENST00000598020 SMIM12Q96EX1 92 aa14.4□□□□□ -0.1
PNKP-211ENST00000598020 C18orf15Q96N68 181 aa14.4□□□□□ -0.1
PNKP-211ENST00000598020 IGKV3D-20A0A0C4DH25 116 aa14.39□□□□□ -0.11
PNKP-211ENST00000598020 SH2D1AO60880 128 aa14.39□□□□□ -0.11
PNKP-211ENST00000598020 Q6ZTI0 123 aa14.39□□□□□ -0.11
PNKP-211ENST00000598020 TENM2Q9NT68 2774 aa14.38□□□□□ -0.11
PNKP-211ENST00000598020 TCTAP57738 103 aa14.38□□□□□ -0.11
PNKP-211ENST00000598020 CENPWQ5EE01 88 aa14.38□□□□□ -0.11
PNKP-211ENST00000598020 TOR2AQ5JU69 321 aa14.38□□□□□ -0.11
PNKP-211ENST00000598020 NHLRC2Q8NBF2 726 aa14.38□□□□□ -0.11
PNKP-211ENST00000598020 DYNC2H1Q8NCM8 4307 aaKnown RBP14.37□□□□□ -0.11
PNKP-211ENST00000598020 RAB19A4D1S5 217 aa14.37□□□□□ -0.11
PNKP-211ENST00000598020 IGLV2-8P01709 118 aa14.37□□□□□ -0.11
PNKP-211ENST00000598020 ATP5G1P05496 136 aa14.37□□□□□ -0.11
PNKP-211ENST00000598020 FAM210BQ96KR6 192 aa14.37□□□□□ -0.11
PNKP-211ENST00000598020 EIF5A2Q9GZV4 153 aaKnown RBP14.37□□□□□ -0.11
PNKP-211ENST00000598020 TRGV1A0A0A0MS02 117 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 GAGE12BA1L429 117 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 GAGE7O76087 117 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 ORM1P02763 201 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 GAGE12FP0CL80 117 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 GAGE12GP0CL81 117 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 GAGE12IP0CL82 117 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 GNG4P50150 75 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 LINC01559Q495D7 138 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 DNLZQ5SXM8 178 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 PCNPQ8WW12 178 aaKnown RBP14.36□□□□□ -0.11
PNKP-211ENST00000598020 RASL10AQ92737 203 aa14.36□□□□□ -0.11
PNKP-211ENST00000598020 TRBV20OR9-2A0A075B6H5 130 aa14.35□□□□□ -0.11
PNKP-211ENST00000598020 KRBOX1C9JBD0 128 aa14.35□□□□□ -0.11
PNKP-211ENST00000598020 C9orf85Q96MD7 179 aa14.35□□□□□ -0.11
PNKP-211ENST00000598020 MUC4Q99102 2169 aa14.34□□□□□ -0.11
PNKP-211ENST00000598020 B4DEV8 164 aa14.34□□□□□ -0.11
PNKP-211ENST00000598020 C9JCJ5 164 aa14.34□□□□□ -0.11
PNKP-211ENST00000598020 M0R2P5 195 aa14.34□□□□□ -0.11
PNKP-211ENST00000598020 RNASE3P12724 160 aaKnown RBP14.34□□□□□ -0.11
PNKP-211ENST00000598020 ZNF575Q86XF7 245 aa14.34□□□□□ -0.11
PNKP-211ENST00000598020 PTH2Q96A98 100 aa14.34□□□□□ -0.11
PNKP-211ENST00000598020 IGLL5B9A064 214 aa14.33□□□□□ -0.12
PNKP-211ENST00000598020 PARLQ9H300 379 aa14.33□□□□□ -0.12
PNKP-211ENST00000598020 BIN3Q9NQY0 253 aa14.33□□□□□ -0.12
PNKP-211ENST00000598020 MRPL16Q9NX20 251 aaKnown RBP14.33□□□□□ -0.12
PNKP-211ENST00000598020 TRGV2A0A075B6R0 118 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 IGHV4-4A0A075B6R2 117 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 SRP19P09132 144 aaKnown RBP14.32□□□□□ -0.12
PNKP-211ENST00000598020 HTN3P15516 51 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 ASIPP42127 132 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 NDUFAF3Q9BU61 184 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 SMDT1Q9H4I9 107 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 APLNQ9ULZ1 77 aa14.32□□□□□ -0.12
PNKP-211ENST00000598020 M0R036 132 aa14.31□□□□□ -0.12
PNKP-211ENST00000598020 CXCL1P09341 107 aa14.31□□□□□ -0.12
PNKP-211ENST00000598020 RAB14P61106 215 aa14.31□□□□□ -0.12
PNKP-211ENST00000598020 IL36BQ9NZH7 164 aa14.31□□□□□ -0.12
PNKP-211ENST00000598020 PLECQ15149 4684 aaKnown RBP14.3□□□□□ -0.12
PNKP-211ENST00000598020 F5H768 121 aa14.3□□□□□ -0.12
PNKP-211ENST00000598020 S100A4P26447 101 aaKnown RBP14.3□□□□□ -0.12
PNKP-211ENST00000598020 IFITM2Q01629 132 aa14.3□□□□□ -0.12
PNKP-211ENST00000598020 PRR27Q6MZM9 219 aa14.3□□□□□ -0.12
PNKP-211ENST00000598020 C19orf71A6NCJ1 209 aa14.29□□□□□ -0.12
PNKP-211ENST00000598020 PGPEP1LA6NFU8 196 aa14.29□□□□□ -0.12
PNKP-211ENST00000598020 MGST1P10620 155 aaKnown RBP14.29□□□□□ -0.12
PNKP-211ENST00000598020 PEA15Q15121 130 aa14.29□□□□□ -0.12
PNKP-211ENST00000598020 PIK3CD-AS1Q5SR53 167 aa14.29□□□□□ -0.12
PNKP-211ENST00000598020 LY96Q9Y6Y9 160 aa14.29□□□□□ -0.12
PNKP-211ENST00000598020 HOXA5P20719 270 aa14.28□□□□□ -0.12
PNKP-211ENST00000598020 ZNF876PQ49A33 203 aa14.28□□□□□ -0.12
PNKP-211ENST00000598020 CLLU1Q5K131 121 aa14.28□□□□□ -0.12
PNKP-211ENST00000598020 OCC1Q8TAD7 63 aa14.28□□□□□ -0.12
PNKP-211ENST00000598020 SCRT2Q9NQ03 307 aa14.28□□□□□ -0.12
PNKP-211ENST00000598020 GRIFINA4D1Z8 144 aa14.27□□□□□ -0.13
PNKP-211ENST00000598020 MED14OSP0DP75 135 aa14.27□□□□□ -0.13
PNKP-211ENST00000598020 OR5I1Q13606 314 aa14.27□□□□□ -0.13
PNKP-211ENST00000598020 TMEM88Q6PEY1 159 aa14.27□□□□□ -0.13
PNKP-211ENST00000598020 DAZAP1Q96EP5 407 aaKnown RBP14.27□□□□□ -0.13
PNKP-211ENST00000598020 TMSB15BA0A087X1C1 80 aa14.26□□□□□ -0.13
PNKP-211ENST00000598020 TRAV4A0A0B4J268 109 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms