RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 MAP1AP78559 2803 aaPredicted RBP11.95□□□□□ -0.5
IRF3-219ENST00000597636 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 LCNL1Q6ZST4 164 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 MRPL16Q9NX20 251 aaKnown RBP11.94□□□□□ -0.5
IRF3-219ENST00000597636 TRAV26-1A0A087WT03 109 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
IRF3-219ENST00000597636 NDPQ00604 133 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 HES1Q14469 280 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 RNF182Q8N6D2 247 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 SYT8Q8NBV8 401 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 CDIP1Q9H305 208 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
IRF3-219ENST00000597636 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
IRF3-219ENST00000597636 TACC2O95359 2948 aa11.93□□□□□ -0.5
IRF3-219ENST00000597636 SVEP1Q4LDE5 3571 aa11.93□□□□□ -0.5
IRF3-219ENST00000597636 C8orf86Q6ZUL3 223 aa11.93□□□□□ -0.5
IRF3-219ENST00000597636 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
IRF3-219ENST00000597636 AGPAT4-IT1Q9H0P7 198 aa11.93□□□□□ -0.5
IRF3-219ENST00000597636 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
IRF3-219ENST00000597636 KLRD1Q13241 179 aa11.93□□□□□ -0.5
IRF3-219ENST00000597636 GEMIN7Q9H840 131 aaKnown RBP11.93□□□□□ -0.5
IRF3-219ENST00000597636 SMIM2Q9BVW6 85 aa11.92□□□□□ -0.5
IRF3-219ENST00000597636 ANKHD1Q8IWZ3 2542 aaKnown RBP11.92□□□□□ -0.5
IRF3-219ENST00000597636 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
IRF3-219ENST00000597636 OR11H6Q8NGC7 330 aa11.92□□□□□ -0.5
IRF3-219ENST00000597636 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
IRF3-219ENST00000597636 TMEM78Q5T7P6 136 aa11.91□□□□□ -0.5
IRF3-219ENST00000597636 SPANXN1Q5VSR9 72 aa11.91□□□□□ -0.5
IRF3-219ENST00000597636 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
IRF3-219ENST00000597636 NFE4Q86UQ8 179 aa11.91□□□□□ -0.5
IRF3-219ENST00000597636 CRYBA4P53673 196 aa11.91□□□□□ -0.5
IRF3-219ENST00000597636 NEXN-AS1Q8NBZ9 246 aa11.91□□□□□ -0.5
IRF3-219ENST00000597636 ZNF418Q8TF45 676 aaPredicted RBP11.91□□□□□ -0.5
IRF3-219ENST00000597636 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 LINC01549A6NIU2 74 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 A6NJY4 79 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 BUB3O43684 328 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 WFDC12Q8WWY7 111 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 KLK15Q9H2R5 256 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 USP24Q9UPU5 2620 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 SPINK8P0C7L1 97 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 ORMDL2Q53FV1 153 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 TOMM6Q96B49 74 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 SLC50A1Q9BRV3 221 aa11.9□□□□□ -0.5
IRF3-219ENST00000597636 B9A039 149 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 UBE2D1P51668 147 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 PRADC1Q9BSG0 188 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 FLNCQ14315 2725 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 MED13LQ71F56 2210 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 SLC25A16P16260 332 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 UCNP55089 124 aa11.89□□□□□ -0.51
IRF3-219ENST00000597636 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 PSMB2P49721 201 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 MT-ATP8P03928 68 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 GRNP28799 593 aaKnown RBP11.88□□□□□ -0.51
IRF3-219ENST00000597636 FHL3Q13643 280 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 ZFP2Q6ZN57 461 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 Q6ZQT7 251 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
IRF3-219ENST00000597636 UTP20O75691 2785 aaKnown RBP11.88□□□□□ -0.51
IRF3-219ENST00000597636 TSPAN13O95857 204 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 IGHV3-66A0A0C4DH42 116 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 FAM90A27PA6NNH2 459 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 UBE2D3P61077 147 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 SUMO2P61956 95 aaKnown RBP11.87□□□□□ -0.51
IRF3-219ENST00000597636 UBE2D2P62837 147 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.51
IRF3-219ENST00000597636 CDSNQ15517 529 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 SCGB1D4Q6XE38 83 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 Q6ZUT4 128 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 VKORC1Q9BQB6 163 aa11.87□□□□□ -0.51
IRF3-219ENST00000597636 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 PLEKHB2Q96CS7 222 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 H3BVH4 76 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 XGP55808 180 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 GLMPQ8WWB7 406 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 PTH2Q96A98 100 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 SPG11Q96JI7 2443 aa11.86□□□□□ -0.51
IRF3-219ENST00000597636 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 COX6B1P14854 86 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 CCL21O00585 134 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 CD7P09564 240 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 KLRB1Q12918 225 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 PPDPFLQ8WWR9 84 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 RASL10AQ92737 203 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 CARD19Q96LW7 228 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 CENPEQ02224 2701 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
IRF3-219ENST00000597636 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms