RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 IGKV2D-24A0A075B6R9 120 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 GNRH2O43555 120 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 NDUFB6O95139 128 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 TYMSP04818 313 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 MGST1P10620 155 aaKnown RBP6.58□□□□□ -1.36
TRIM28-210ENST00000597618 FGF7P21781 194 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 S100A11P31949 105 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 GCSAMLQ5JQS6 135 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 CFAP126Q5VTH2 177 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 TMED6Q8WW62 240 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 PHYHIPLQ96FC7 376 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 FAM167A-AS1Q96KT0 104 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 PAXXQ9BUH6 204 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 SLIRPQ9GZT3 109 aaKnown RBP6.58□□□□□ -1.36
TRIM28-210ENST00000597618 SDF2L1Q9HCN8 221 aa6.58□□□□□ -1.36
TRIM28-210ENST00000597618 A0A087WWC5 75 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 ASIPP42127 132 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 SULT1A1P50225 295 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 HBG1P69891 147 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 HBG2P69892 147 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 C14orf177Q52M58 125 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 MIR17HGQ75NE6 70 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 FXYD5Q96DB9 178 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 KCNS1Q96KK3 526 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 BCL7BQ9BQE9 202 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 NPCDR1Q9BY65 106 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 FLVCR2Q9UPI3 526 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
TRIM28-210ENST00000597618 URGCP-MRPS24S4R325 110 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 V9GYH0 126 aa6.57□□□□□ -1.36
TRIM28-210ENST00000597618 IGHV3-73A0A0B4J1V6 119 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 FAM24AA6NFZ4 105 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 PVALBP20472 110 aaPredicted RBP6.56□□□□□ -1.36
TRIM28-210ENST00000597618 INPP1P49441 399 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 RANP62826 216 aaKnown RBP6.56□□□□□ -1.36
TRIM28-210ENST00000597618 STX12Q86Y82 276 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 MITD1Q8WV92 249 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 ASB13Q8WXK3 278 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 C2orf50Q96LR7 162 aa6.56□□□□□ -1.36
TRIM28-210ENST00000597618 NAP1L6A6NFF2 107 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 LINC00694P0DN24 101 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 TMBIM6P55061 237 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 ATP6V1FQ16864 119 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 DPPA3Q6W0C5 159 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 OR10G9Q8NGN4 311 aa6.55□□□□□ -1.36
TRIM28-210ENST00000597618 MRPS26Q9BYN8 205 aaKnown RBP6.55□□□□□ -1.36
TRIM28-210ENST00000597618 LYRM2Q9NU23 88 aaPredicted RBP6.55□□□□□ -1.36
TRIM28-210ENST00000597618 IGSF23A1L1A6 192 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 GAGE12JA6NER3 117 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 F6UZH7 168 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 CCSO14618 274 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 OR7C2O60412 319 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 NOL3O60936 208 aaKnown RBP6.54□□□□□ -1.36
TRIM28-210ENST00000597618 UBE2L3P68036 154 aaKnown RBP6.54□□□□□ -1.36
TRIM28-210ENST00000597618 GAGE1Q13065 139 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 GAGE4Q13068 117 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 GAGE5Q13069 117 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 GAGE13Q4V321 117 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 SPANXN2Q5MJ10 180 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 FFAR4Q5NUL3 377 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 ATRAIDQ6UW56 229 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 CYB561D1Q8N8Q1 229 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 UBE2WQ96B02 151 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 KCNIP2Q9NS61 270 aa6.54□□□□□ -1.36
TRIM28-210ENST00000597618 A0A0D9SG52 128 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 FAM25EA8MYX2 175 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 ELOBQ15370 118 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 NIT1Q86X76 327 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 TMEM252Q8N6L7 170 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 HSD17B11Q8NBQ5 300 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 PTH2Q96A98 100 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
TRIM28-210ENST00000597618 A0A087WX48 190 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 H3BMQ9 156 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 FGF8P55075 233 aaPredicted RBP6.52□□□□□ -1.37
TRIM28-210ENST00000597618 S100A10P60903 97 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 Q0VG73 95 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 KCNIP4Q6PIL6 250 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 ZFP2Q6ZN57 461 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 CMTM2Q8TAZ6 248 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 THAP6Q8TBB0 222 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 C9orf85Q96MD7 179 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 TREM1Q9NP99 234 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 OTORQ9NRC9 128 aa6.52□□□□□ -1.37
TRIM28-210ENST00000597618 S100A5P33763 92 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 CNPY1Q3B7I2 92 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 FAM74A1Q5RGS3 127 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 TRIQKQ629K1 86 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 ZC2HC1AQ96GY0 325 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 NMES1Q9C002 83 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms