RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 X6R8D5 127 aa10.84□□□□□ -0.67
TRIM28-207ENST00000597136 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 M0R036 132 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 ERVFC1-1P60608 527 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 SFRP2Q96HF1 295 aa10.83□□□□□ -0.68
TRIM28-207ENST00000597136 PRM2P04554 102 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 IBA57Q5T440 356 aaKnown RBP10.82□□□□□ -0.68
TRIM28-207ENST00000597136 SVBPQ8N300 66 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 OSTCQ9NRP0 149 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 IGHV3OR16-12A0A075B7B8 117 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 P01737 135 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 ORM1P02763 201 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 TMEM256Q8N2U0 113 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
TRIM28-207ENST00000597136 B4DEV8 164 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 H7BYZ3 331 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 MUC21Q5SSG8 566 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 ZNF705AQ6ZN79 300 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-207ENST00000597136 C15orf54Q8N8G6 183 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 LINC01587Q99440 93 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 NAGKQ9UJ70 344 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 GOLT1BQ9Y3E0 138 aa10.81□□□□□ -0.68
TRIM28-207ENST00000597136 IGHV1OR15-1A0A075B7D0 117 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 IGKV3D-20A0A0C4DH25 116 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 SNAPINO95295 136 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 TDRG1Q3Y452 100 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 ANXA2RQ3ZCQ2 193 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 RNF212Q495C1 297 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 FAM159AQ6UWV7 190 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 Q8NAQ8 132 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 PYGO2Q9BRQ0 406 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 TMEM208Q9BTX3 173 aa10.8□□□□□ -0.68
TRIM28-207ENST00000597136 RPP21Q9H633 154 aaKnown RBP10.8□□□□□ -0.68
TRIM28-207ENST00000597136 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 TMEM189A5PLL7 270 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 ZNF705GA8MUZ8 300 aaPredicted RBP10.79□□□□□ -0.68
TRIM28-207ENST00000597136 GATCO43716 136 aaKnown RBP10.79□□□□□ -0.68
TRIM28-207ENST00000597136 MT-ND4LP03901 98 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 S100A1P23297 94 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 RPL19P84098 196 aaKnown RBP10.79□□□□□ -0.68
TRIM28-207ENST00000597136 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 LINC00467Q9BRT7 94 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 V9GYV3 84 aa10.79□□□□□ -0.68
TRIM28-207ENST00000597136 TMSB15BA0A087X1C1 80 aa10.78□□□□□ -0.68
TRIM28-207ENST00000597136 C7orf77A4D0Y5 90 aa10.78□□□□□ -0.68
TRIM28-207ENST00000597136 RHEBQ15382 184 aa10.78□□□□□ -0.68
TRIM28-207ENST00000597136 KCNS1Q96KK3 526 aa10.78□□□□□ -0.68
TRIM28-207ENST00000597136 PPP1R2P9O14990 202 aa10.77□□□□□ -0.68
TRIM28-207ENST00000597136 GNRH2O43555 120 aa10.77□□□□□ -0.68
TRIM28-207ENST00000597136 HTN1P15515 57 aa10.77□□□□□ -0.68
TRIM28-207ENST00000597136 ANAPC16Q96DE5 110 aa10.77□□□□□ -0.68
TRIM28-207ENST00000597136 TP53TG3Q9ULZ0 132 aa10.77□□□□□ -0.68
TRIM28-207ENST00000597136 NACAE9PAV3 2078 aa10.77□□□□□ -0.69
TRIM28-207ENST00000597136 MIFP14174 115 aa10.77□□□□□ -0.69
TRIM28-207ENST00000597136 CT83Q5H943 113 aa10.77□□□□□ -0.69
TRIM28-207ENST00000597136 ATRAIDQ6UW56 229 aa10.77□□□□□ -0.69
TRIM28-207ENST00000597136 RPS10P5Q9NQ39 176 aa10.77□□□□□ -0.69
TRIM28-207ENST00000597136 STARD9Q9P2P6 4700 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 A0A087WWC5 75 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 GRIFINA4D1Z8 144 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 CBY3A6NI87 242 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 TYMSP04818 313 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 GZMBP10144 247 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 RPS20P60866 119 aaKnown RBP10.76□□□□□ -0.69
TRIM28-207ENST00000597136 MUC7Q8TAX7 377 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 NEU1Q99519 415 aa10.76□□□□□ -0.69
TRIM28-207ENST00000597136 XKRY2A2RUG3 117 aa10.75□□□□□ -0.69
TRIM28-207ENST00000597136 A8MWL6 223 aa10.75□□□□□ -0.69
TRIM28-207ENST00000597136 AZU1P20160 251 aa10.75□□□□□ -0.69
TRIM28-207ENST00000597136 IL17DQ8TAD2 202 aa10.75□□□□□ -0.69
TRIM28-207ENST00000597136 CTDSP1Q9GZU7 261 aa10.75□□□□□ -0.69
TRIM28-207ENST00000597136 CXCL1P09341 107 aa10.74□□□□□ -0.69
TRIM28-207ENST00000597136 DNLZQ5SXM8 178 aa10.74□□□□□ -0.69
TRIM28-207ENST00000597136 ZFAND6Q6FIF0 208 aa10.74□□□□□ -0.69
TRIM28-207ENST00000597136 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
TRIM28-207ENST00000597136 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
TRIM28-207ENST00000597136 TMEM242Q9NWH2 141 aa10.74□□□□□ -0.69
TRIM28-207ENST00000597136 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 SMIM9A6NGZ8 99 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 ASIPP42127 132 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 EMP1P54849 157 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 RRN3P1Q2M238 152 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 GTSF1Q8WW33 167 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 MDFICQ9P1T7 246 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 CELA1Q9UNI1 258 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 RNASE3P12724 160 aaKnown RBP10.73□□□□□ -0.69
TRIM28-207ENST00000597136 NANOS2P60321 138 aaKnown RBP10.73□□□□□ -0.69
TRIM28-207ENST00000597136 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 RNASE8Q8TDE3 154 aaKnown RBP10.73□□□□□ -0.69
TRIM28-207ENST00000597136 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
TRIM28-207ENST00000597136 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
TRIM28-207ENST00000597136 MUC4Q99102 2169 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms