RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 HTN1P15515 57 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 TAGLN2P37802 199 aaKnown RBP7.51□□□□□ -1.21
LIG1-210ENST00000596332 SMUG1Q53HV7 270 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 UQCC3Q6UW78 93 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 BAGE2Q86Y30 109 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 TMEM263Q8WUH6 116 aaKnown RBP7.51□□□□□ -1.21
LIG1-210ENST00000596332 TMEM208Q9BTX3 173 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 TRAV21A0A0B4J279 112 aa7.5□□□□□ -1.21
LIG1-210ENST00000596332 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
LIG1-210ENST00000596332 TYMSP04818 313 aa7.5□□□□□ -1.21
LIG1-210ENST00000596332 UBE2G1P62253 170 aa7.5□□□□□ -1.21
LIG1-210ENST00000596332 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
LIG1-210ENST00000596332 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
LIG1-210ENST00000596332 GSN-AS1Q9NRJ2 163 aa7.5□□□□□ -1.21
LIG1-210ENST00000596332 PLECQ15149 4684 aaKnown RBP7.49□□□□□ -1.21
LIG1-210ENST00000596332 TMEM189A5PLL7 270 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 C19orf71A6NCJ1 209 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 FABP5P3A8MUU1 101 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 K7EN84 100 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 SPINK4O60575 86 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 SH2D1AO60880 128 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 RNASE3P12724 160 aaKnown RBP7.49□□□□□ -1.21
LIG1-210ENST00000596332 EMP1P54849 157 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 TCL1AP56279 114 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 CENPWQ5EE01 88 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 IBA57Q5T440 356 aaKnown RBP7.49□□□□□ -1.21
LIG1-210ENST00000596332 OCC1Q8TAD7 63 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 MUC7Q8TAX7 377 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 C16orf74Q96GX8 76 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 NDFIP1Q9BT67 221 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 PARLQ9H300 379 aa7.49□□□□□ -1.21
LIG1-210ENST00000596332 NOP10Q9NPE3 64 aaKnown RBP7.49□□□□□ -1.21
LIG1-210ENST00000596332 TENM2Q9NT68 2774 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 CXorf65A6NEN9 183 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 CBY3A6NI87 242 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 C9JCJ5 164 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 DNLZQ5SXM8 178 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 Q6ZTC4 211 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
LIG1-210ENST00000596332 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
LIG1-210ENST00000596332 TIMM8BQ9Y5J9 83 aaPredicted RBP7.48□□□□□ -1.21
LIG1-210ENST00000596332 LYRM9A8MSI8 78 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 OR5I1Q13606 314 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 FAM159AQ6UWV7 190 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 Q6ZTI0 123 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 POM121L12Q8N7R1 296 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 C9orf85Q96MD7 179 aa7.47□□□□□ -1.21
LIG1-210ENST00000596332 RPL19P84098 196 aaKnown RBP7.46□□□□□ -1.22
LIG1-210ENST00000596332 FAM162BQ5T6X4 162 aa7.46□□□□□ -1.22
LIG1-210ENST00000596332 SMIM12Q96EX1 92 aa7.46□□□□□ -1.22
LIG1-210ENST00000596332 C18orf15Q96N68 181 aa7.46□□□□□ -1.22
LIG1-210ENST00000596332 SCRT2Q9NQ03 307 aa7.46□□□□□ -1.22
LIG1-210ENST00000596332 MUC4Q99102 2169 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 M0R036 132 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 SCO1O75880 301 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 GNG4P50150 75 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 ZFAND6Q6FIF0 208 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
LIG1-210ENST00000596332 PHLDA1Q8WV24 401 aaPredicted RBP7.45□□□□□ -1.22
LIG1-210ENST00000596332 RASL10AQ92737 203 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 KCNS1Q96KK3 526 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 SSBP4Q9BWG4 385 aaPredicted RBP7.45□□□□□ -1.22
LIG1-210ENST00000596332 SMDT1Q9H4I9 107 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 NAGKQ9UJ70 344 aa7.45□□□□□ -1.22
LIG1-210ENST00000596332 TRGV11A0A075B6L2 103 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 C3orf84H3BNL1 204 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 ORM1P02763 201 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 HOXA5P20719 270 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 LGALS9BQ3B8N2 356 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
LIG1-210ENST00000596332 LINC01551Q86U37 167 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 PTH2Q96A98 100 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 SDF2L1Q9HCN8 221 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
LIG1-210ENST00000596332 LY96Q9Y6Y9 160 aa7.44□□□□□ -1.22
LIG1-210ENST00000596332 KMT2CQ8NEZ4 4911 aaKnown RBP7.43□□□□□ -1.22
LIG1-210ENST00000596332 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 B4DEV8 164 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 GAGE7O76087 117 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 APOC3P02656 99 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 ZNF415Q09FC8 603 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 PEA15Q15121 130 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 PRR27Q6MZM9 219 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 SVBPQ8N300 66 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 SPXQ9BT56 116 aa7.43□□□□□ -1.22
LIG1-210ENST00000596332 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms