RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 A0A0D9SG52 128 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 FAM74A7A6NL05 159 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 F6UZH7 168 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 TYMSP04818 313 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 SEC11BP0C7V7 166 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 ZNF80P51504 273 aaPredicted RBP9.03□□□□□ -0.96
USE1-207ENST00000596136 C11orf21Q9P2W6 132 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
USE1-207ENST00000596136 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 PFN1P07737 140 aaKnown RBP9.02□□□□□ -0.97
USE1-207ENST00000596136 CRYBA4P53673 196 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 FGF8P55075 233 aaPredicted RBP9.02□□□□□ -0.97
USE1-207ENST00000596136 SMUG1Q53HV7 270 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 SAPCD1Q5SSQ6 148 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 C1orf134Q5TEV5 83 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 HIST1H2BAQ96A08 127 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 NAGKQ9UJ70 344 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 HHLA3Q9XRX5 114 aa9.02□□□□□ -0.97
USE1-207ENST00000596136 MRPS16Q9Y3D3 137 aaKnown RBP9.02□□□□□ -0.97
USE1-207ENST00000596136 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 M0R2P5 195 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 PAX4O43316 350 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 GCGP01275 180 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 FHITP49789 147 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 SOHLH1Q5JUK2 328 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 PRNTQ86SH4 94 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 MBD3L1Q8WWY6 194 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 LINC00479Q96M42 142 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 Q9H8V8 135 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
USE1-207ENST00000596136 UMAD1C9J7I0 102 aa9□□□□□ -0.97
USE1-207ENST00000596136 PEX7O00628 323 aa9□□□□□ -0.97
USE1-207ENST00000596136 BCL2L11O43521 198 aa9□□□□□ -0.97
USE1-207ENST00000596136 IFNA7P01567 189 aa9□□□□□ -0.97
USE1-207ENST00000596136 IGHV3-53P01767 116 aa9□□□□□ -0.97
USE1-207ENST00000596136 UBE2G2P60604 165 aa9□□□□□ -0.97
USE1-207ENST00000596136 COX8CQ7Z4L0 72 aa9□□□□□ -0.97
USE1-207ENST00000596136 PTH2Q96A98 100 aa9□□□□□ -0.97
USE1-207ENST00000596136 ZNF479Q96JC4 524 aa9□□□□□ -0.97
USE1-207ENST00000596136 TCEAL7Q9BRU2 100 aa9□□□□□ -0.97
USE1-207ENST00000596136 ICOSQ9Y6W8 199 aa9□□□□□ -0.97
USE1-207ENST00000596136 HERC2O95714 4834 aa9□□□□□ -0.97
USE1-207ENST00000596136 DNAH11Q96DT5 4516 aa9□□□□□ -0.97
USE1-207ENST00000596136 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
USE1-207ENST00000596136 TRAV4A0A0B4J268 109 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 TRAV34A0A0B4J273 112 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 PPT1P50897 306 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 ZFP69Q49AA0 526 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 STOML3Q8TAV4 291 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
USE1-207ENST00000596136 TRGV4A0A0C4DH28 118 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 TRBV6-1A0A0K0K1D8 114 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 A0A1W2PPQ1 181 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 KANTRA0A1W2PQU2 76 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 EIF5AP63241 154 aaKnown RBP8.98□□□□□ -0.97
USE1-207ENST00000596136 MRPL23Q16540 153 aaKnown RBP8.98□□□□□ -0.97
USE1-207ENST00000596136 DPPA3Q6W0C5 159 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 TMUB2Q71RG4 321 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 ZNF471Q9BX82 626 aaPredicted RBP8.98□□□□□ -0.97
USE1-207ENST00000596136 ZFP30Q9Y2G7 519 aa8.98□□□□□ -0.97
USE1-207ENST00000596136 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
USE1-207ENST00000596136 FABP5P3A8MUU1 101 aa8.97□□□□□ -0.97
USE1-207ENST00000596136 RNASE3P12724 160 aaKnown RBP8.97□□□□□ -0.97
USE1-207ENST00000596136 BTF3P20290 206 aaKnown RBP8.97□□□□□ -0.97
USE1-207ENST00000596136 TTC32Q5I0X7 151 aa8.97□□□□□ -0.97
USE1-207ENST00000596136 Q86TA4 180 aa8.97□□□□□ -0.97
USE1-207ENST00000596136 OR4C5Q8NGB2 326 aa8.97□□□□□ -0.97
USE1-207ENST00000596136 KRTAP1-5Q9BYS1 174 aa8.97□□□□□ -0.97
USE1-207ENST00000596136 K7EQD1 137 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 CIDEAO60543 219 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 ORM1P02763 201 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 CRIP1P50238 77 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 LGALSLQ3ZCW2 172 aaPredicted RBP8.96□□□□□ -0.98
USE1-207ENST00000596136 ZNF876PQ49A33 203 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 PIK3CD-AS1Q5SR53 167 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 LYPD5Q6UWN5 251 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 Q6ZNX1 250 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 NEGR1Q7Z3B1 354 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 TCTE3Q8IZS6 198 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 FMC1Q96HJ9 113 aa8.96□□□□□ -0.98
USE1-207ENST00000596136 RS1O15537 224 aa8.95□□□□□ -0.98
USE1-207ENST00000596136 PAGE4O60829 102 aa8.95□□□□□ -0.98
USE1-207ENST00000596136 TPT1P13693 172 aaKnown RBP8.95□□□□□ -0.98
USE1-207ENST00000596136 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
USE1-207ENST00000596136 DNLZQ5SXM8 178 aa8.95□□□□□ -0.98
USE1-207ENST00000596136 FAM213BQ8TBF2 198 aa8.95□□□□□ -0.98
USE1-207ENST00000596136 PGPEP1LA6NFU8 196 aa8.94□□□□□ -0.98
USE1-207ENST00000596136 LTAP01374 205 aa8.94□□□□□ -0.98
USE1-207ENST00000596136 GYPEP15421 78 aa8.94□□□□□ -0.98
USE1-207ENST00000596136 CFAP126Q5VTH2 177 aa8.94□□□□□ -0.98
USE1-207ENST00000596136 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
USE1-207ENST00000596136 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms