RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
VRK3-210ENST00000596121 FAM159AQ6UWV7 190 aa7.79□□□□□ -1.16
VRK3-210ENST00000596121 Q86TA4 180 aa7.79□□□□□ -1.16
VRK3-210ENST00000596121 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
VRK3-210ENST00000596121 C18orf15Q96N68 181 aa7.79□□□□□ -1.16
VRK3-210ENST00000596121 NKX6-2Q9C056 277 aaPredicted RBP7.79□□□□□ -1.16
VRK3-210ENST00000596121 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
VRK3-210ENST00000596121 TRAV26-1A0A087WT03 109 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 TRAV1-1A0A0B4J248 108 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 A0A0J9YY99 117 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 SULT1A2P50226 295 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 ZNF415Q09FC8 603 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 OR5I1Q13606 314 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 SLC51BQ86UW2 128 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 POM121L12Q8N7R1 296 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 ZC2HC1AQ96GY0 325 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 VSIG2Q96IQ7 327 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 BOLA1Q9Y3E2 137 aa7.78□□□□□ -1.16
VRK3-210ENST00000596121 TRGV11A0A075B6L2 103 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 TRGV2A0A075B6R0 118 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 IGKV3D-20A0A0C4DH25 116 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 FBLL1A6NHQ2 334 aaKnown RBP7.77□□□□□ -1.17
VRK3-210ENST00000596121 IGHV3-53P01767 116 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 PFN1P07737 140 aaKnown RBP7.77□□□□□ -1.17
VRK3-210ENST00000596121 LGALS9BQ3B8N2 356 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 ZFP69Q49AA0 526 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 SMUG1Q53HV7 270 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 COX8CQ7Z4L0 72 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 FRAS1Q86XX4 4008 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 DNAH17Q9UFH2 4485 aa7.77□□□□□ -1.17
VRK3-210ENST00000596121 TRBV6-1A0A0K0K1D8 114 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 SCO2A0A1W2PP80 73 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 NUDT3O95989 172 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 P0DMU3 169 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 FAM231AP0DMU4 169 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 FAM231CP0DMU5 169 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 PPT1P50897 306 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 RAB5CP51148 216 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 FHL2Q14192 279 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 C15orf53Q8NAA6 179 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 RASL10AQ92737 203 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 SPXQ9BT56 116 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 SDF2L1Q9HCN8 221 aa7.76□□□□□ -1.17
VRK3-210ENST00000596121 LTAP01374 205 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 EIF5AL1Q6IS14 154 aaKnown RBP7.75□□□□□ -1.17
VRK3-210ENST00000596121 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 FMC1Q96HJ9 113 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 ZNF479Q96JC4 524 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 KCNS1Q96KK3 526 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 TCEAL7Q9BRU2 100 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 GNG13Q9P2W3 67 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 BIRC6Q9NR09 4857 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
VRK3-210ENST00000596121 FABP5P3A8MUU1 101 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 M0R2P5 195 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 SH2D1AO60880 128 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 SFTA3P0C7M3 94 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 RNASE3P12724 160 aaKnown RBP7.74□□□□□ -1.17
VRK3-210ENST00000596121 AKR1C3P42330 323 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 C9orf85Q96MD7 179 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 ZFP30Q9Y2G7 519 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
VRK3-210ENST00000596121 KRBOX1C9JBD0 128 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 UBE2G1P62253 170 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 RNF212Q495C1 297 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 ALKAL2Q6UX46 152 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 DERL1Q9BUN8 251 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 MLST8Q9BVC4 326 aa7.73□□□□□ -1.17
VRK3-210ENST00000596121 IGLV2-18A0A075B6J9 118 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 A0A096LPF7 62 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 PGPEP1LA6NFU8 196 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 H3BNG1 76 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 M0R036 132 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 M0R2N4 97 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 CRYBA4P53673 196 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 ESRGQ1W209 222 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 UBE2DNLQ8IWF7 75 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 C11orf52Q96A22 123 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 MANBALQ9NQG1 85 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 HHLA3Q9XRX5 114 aa7.72□□□□□ -1.17
VRK3-210ENST00000596121 GRIFINA4D1Z8 144 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 C9JCJ5 164 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 IGLV2-8P01709 118 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 ORM1P02763 201 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 RPL35P42766 123 aaKnown RBP7.71□□□□□ -1.18
VRK3-210ENST00000596121 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 ZNF506Q5JVG8 444 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 FAM162BQ5T6X4 162 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 Q6ZR54 194 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 BAGE2Q86Y30 109 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 ZNRF2Q8NHG8 242 aa7.71□□□□□ -1.18
VRK3-210ENST00000596121 TMSB15BA0A087X1C1 80 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 TRAV4A0A0B4J268 109 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 RAB19A4D1S5 217 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 B4DEV8 164 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms