RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
ZNF541-205ENST00000595558 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
ZNF541-205ENST00000595558 TRAV40A0A0B4J280 105 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 TMEM8BA6NDV4 472 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 NAV2Q8IVL1 2488 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 J3KRW8 73 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 IGKCP01834 107 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 IGF1P05019 195 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 LCNL1Q6ZST4 164 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
ZNF541-205ENST00000595558 SORL1Q92673 2214 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 SRSF2Q01130 221 aaKnown RBP11.73□□□□□ -0.53
ZNF541-205ENST00000595558 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
ZNF541-205ENST00000595558 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
ZNF541-205ENST00000595558 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 CENPVL3A0A0U1RRI6 287 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 PRB1P04280 392 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 IGHV4-61A0A0C4DH41 118 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 DEFB1P60022 68 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 LY6EQ16553 131 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 PRR9Q5T870 116 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 NRACQ8N912 160 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 NPFFR1Q9GZQ6 430 aa11.72□□□□□ -0.53
ZNF541-205ENST00000595558 MINOS1Q5TGZ0 78 aa11.71□□□□□ -0.53
ZNF541-205ENST00000595558 Q8N8P6 123 aa11.71□□□□□ -0.53
ZNF541-205ENST00000595558 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.53
ZNF541-205ENST00000595558 MINOS1-NBL1R4GNA1 71 aa11.71□□□□□ -0.53
ZNF541-205ENST00000595558 SAMD5Q5TGI4 173 aa11.71□□□□□ -0.54
ZNF541-205ENST00000595558 C8orf86Q6ZUL3 223 aa11.71□□□□□ -0.54
ZNF541-205ENST00000595558 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
ZNF541-205ENST00000595558 SMIM13P0DJ93 91 aa11.7□□□□□ -0.54
ZNF541-205ENST00000595558 IGHV4-38-2P0DP08 117 aa11.7□□□□□ -0.54
ZNF541-205ENST00000595558 Q6ZS46 218 aa11.7□□□□□ -0.54
ZNF541-205ENST00000595558 SMIM15Q7Z3B0 74 aa11.7□□□□□ -0.54
ZNF541-205ENST00000595558 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
ZNF541-205ENST00000595558 G3V4G9 280 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 SCGB2A1O75556 95 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 DPM2O94777 84 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 GOSR1O95249 250 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 UBE2E1P51965 193 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 NEGR1Q7Z3B1 354 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
ZNF541-205ENST00000595558 NIPBLQ6KC79 2804 aaeCLIP11.69□□□□□ -0.54
ZNF541-205ENST00000595558 H3BVH4 76 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 TMEM78Q5T7P6 136 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
ZNF541-205ENST00000595558 RBAKDNA6NC62 111 aa11.68□□□□□ -0.54
ZNF541-205ENST00000595558 NPFFO15130 113 aa11.68□□□□□ -0.54
ZNF541-205ENST00000595558 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
ZNF541-205ENST00000595558 KLK15Q9H2R5 256 aa11.68□□□□□ -0.54
ZNF541-205ENST00000595558 FABP2P12104 132 aa11.68□□□□□ -0.54
ZNF541-205ENST00000595558 C20orf173Q96LM9 149 aa11.68□□□□□ -0.54
ZNF541-205ENST00000595558 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
ZNF541-205ENST00000595558 LAGE3Q14657 143 aa11.67□□□□□ -0.54
ZNF541-205ENST00000595558 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
ZNF541-205ENST00000595558 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
ZNF541-205ENST00000595558 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
ZNF541-205ENST00000595558 AGRNO00468 2067 aa11.67□□□□□ -0.54
ZNF541-205ENST00000595558 IGHV4-30-2A0A087WSY4 118 aa11.66□□□□□ -0.54
ZNF541-205ENST00000595558 MYOZ3Q8TDC0 251 aa11.66□□□□□ -0.54
ZNF541-205ENST00000595558 ATP5LO75964 103 aa11.65□□□□□ -0.54
ZNF541-205ENST00000595558 CEND1Q8N111 149 aa11.65□□□□□ -0.54
ZNF541-205ENST00000595558 METTL26Q96S19 204 aa11.65□□□□□ -0.54
ZNF541-205ENST00000595558 IGKV3-7A0A075B6H7 116 aa11.65□□□□□ -0.54
ZNF541-205ENST00000595558 IGHV3-11P01762 117 aa11.65□□□□□ -0.54
ZNF541-205ENST00000595558 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
ZNF541-205ENST00000595558 M0R381 172 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 AVPP01185 164 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 BLCAPP62952 87 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 C16orf92Q96LL3 132 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 RAB9AP51151 201 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
ZNF541-205ENST00000595558 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
ZNF541-205ENST00000595558 RPL39LQ96EH5 51 aaKnown RBP11.64□□□□□ -0.55
ZNF541-205ENST00000595558 A0A087WX48 190 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 TEX48A0A1B0GUV7 120 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 EEF1AKMT3Q96AZ1 226 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 C5orf56Q8N8D9 126 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 CCL19Q99731 98 aa11.63□□□□□ -0.55
ZNF541-205ENST00000595558 ATP5J2P56134 94 aa11.62□□□□□ -0.55
ZNF541-205ENST00000595558 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
ZNF541-205ENST00000595558 U3KQE9 123 aa11.62□□□□□ -0.55
ZNF541-205ENST00000595558 APCP25054 2843 aa11.62□□□□□ -0.55
ZNF541-205ENST00000595558 SRSF1Q07955 248 aaKnown RBP eCLIP11.62□□□□□ -0.55
ZNF541-205ENST00000595558 TMEM95Q3KNT9 176 aa11.62□□□□□ -0.55
ZNF541-205ENST00000595558 GPHB5Q86YW7 130 aa11.62□□□□□ -0.55
ZNF541-205ENST00000595558 MTURNQ8N3F0 131 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms