RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 NDFIP1Q9BT67 221 aa15.45■□□□□ 0.06
GTF2F1-204ENST00000594965 PRSS29PA6NIE9 313 aa15.44■□□□□ 0.06
GTF2F1-204ENST00000594965 UBE2G2P60604 165 aa15.44■□□□□ 0.06
GTF2F1-204ENST00000594965 PRNTQ86SH4 94 aa15.44■□□□□ 0.06
GTF2F1-204ENST00000594965 LINC00479Q96M42 142 aa15.44■□□□□ 0.06
GTF2F1-204ENST00000594965 C11orf21Q9P2W6 132 aa15.44■□□□□ 0.06
GTF2F1-204ENST00000594965 NBDYA0A0U1RRE5 68 aa15.43■□□□□ 0.06
GTF2F1-204ENST00000594965 MAP1LC3B2A6NCE7 125 aa15.43■□□□□ 0.06
GTF2F1-204ENST00000594965 FAM74A7A6NL05 159 aa15.43■□□□□ 0.06
GTF2F1-204ENST00000594965 MAP1LC3BQ9GZQ8 125 aa15.43■□□□□ 0.06
GTF2F1-204ENST00000594965 GCGP01275 180 aa15.42■□□□□ 0.06
GTF2F1-204ENST00000594965 FHITP49789 147 aa15.42■□□□□ 0.06
GTF2F1-204ENST00000594965 CRYBA4P53673 196 aa15.42■□□□□ 0.06
GTF2F1-204ENST00000594965 SDF2L1Q9HCN8 221 aa15.42■□□□□ 0.06
GTF2F1-204ENST00000594965 TRAV34A0A0B4J273 112 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 SFTA3P0C7M3 94 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 C1orf134Q5TEV5 83 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 ZNF479Q96JC4 524 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 KCNS1Q96KK3 526 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 UPK3BQ9BT76 320 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 Q9H8V8 135 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 PRO0255Q9UI72 69 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 HHLA3Q9XRX5 114 aa15.41■□□□□ 0.06
GTF2F1-204ENST00000594965 A0A0D9SG52 128 aa15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 FBLL1A6NHQ2 334 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 M0R2P5 195 aa15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 PAX4O43316 350 aa15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 BCL2L11O43521 198 aa15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 PFN1P07737 140 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 SMUG1Q53HV7 270 aa15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 MRPS16Q9Y3D3 137 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-204ENST00000594965 PEX7O00628 323 aa15.39■□□□□ 0.05
GTF2F1-204ENST00000594965 IFNA7P01567 189 aa15.39■□□□□ 0.05
GTF2F1-204ENST00000594965 SEC11BP0C7V7 166 aa15.39■□□□□ 0.05
GTF2F1-204ENST00000594965 NKX6-2Q9C056 277 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-204ENST00000594965 PKD1P98161 4303 aa15.39■□□□□ 0.05
GTF2F1-204ENST00000594965 SLAQ13239 276 aa15.38■□□□□ 0.05
GTF2F1-204ENST00000594965 SAPCD1Q5SSQ6 148 aa15.38■□□□□ 0.05
GTF2F1-204ENST00000594965 ZNF471Q9BX82 626 aaPredicted RBP15.38■□□□□ 0.05
GTF2F1-204ENST00000594965 ARL2-SNX15V9GYD0 113 aa15.38■□□□□ 0.05
GTF2F1-204ENST00000594965 TRAV4A0A0B4J268 109 aa15.37■□□□□ 0.05
GTF2F1-204ENST00000594965 KANTRA0A1W2PQU2 76 aa15.37■□□□□ 0.05
GTF2F1-204ENST00000594965 ZFP69Q49AA0 526 aa15.37■□□□□ 0.05
GTF2F1-204ENST00000594965 KRTAP1-5Q9BYS1 174 aa15.37■□□□□ 0.05
GTF2F1-204ENST00000594965 ICOSQ9Y6W8 199 aa15.37■□□□□ 0.05
GTF2F1-204ENST00000594965 TRGV4A0A0C4DH28 118 aa15.36■□□□□ 0.05
GTF2F1-204ENST00000594965 SOHLH1Q5JUK2 328 aa15.36■□□□□ 0.05
GTF2F1-204ENST00000594965 Q86TA4 180 aa15.36■□□□□ 0.05
GTF2F1-204ENST00000594965 HIST1H2BAQ96A08 127 aa15.36■□□□□ 0.05
GTF2F1-204ENST00000594965 TMUB2Q71RG4 321 aa15.35■□□□□ 0.05
GTF2F1-204ENST00000594965 MBD3L1Q8WWY6 194 aa15.35■□□□□ 0.05
GTF2F1-204ENST00000594965 C9orf85Q96MD7 179 aa15.35■□□□□ 0.05
GTF2F1-204ENST00000594965 IGKV3D-20A0A0C4DH25 116 aa15.34■□□□□ 0.05
GTF2F1-204ENST00000594965 PPT1P50897 306 aa15.34■□□□□ 0.05
GTF2F1-204ENST00000594965 C6orf223Q8N319 242 aa15.34■□□□□ 0.05
GTF2F1-204ENST00000594965 OR4C5Q8NGB2 326 aa15.34■□□□□ 0.05
GTF2F1-204ENST00000594965 STOML3Q8TAV4 291 aa15.34■□□□□ 0.05
GTF2F1-204ENST00000594965 UMAD1C9J7I0 102 aa15.33■□□□□ 0.04
GTF2F1-204ENST00000594965 K7EQD1 137 aa15.33■□□□□ 0.04
GTF2F1-204ENST00000594965 RNASE3P12724 160 aaKnown RBP15.33■□□□□ 0.04
GTF2F1-204ENST00000594965 DPPA3Q6W0C5 159 aa15.33■□□□□ 0.04
GTF2F1-204ENST00000594965 FAM213BQ8TBF2 198 aa15.33■□□□□ 0.04
GTF2F1-204ENST00000594965 CRIP1P50238 77 aa15.32■□□□□ 0.04
GTF2F1-204ENST00000594965 MRPL23Q16540 153 aaKnown RBP15.32■□□□□ 0.04
GTF2F1-204ENST00000594965 CST9LP1Q5W188 147 aa15.32■□□□□ 0.04
GTF2F1-204ENST00000594965 LYPD5Q6UWN5 251 aa15.32■□□□□ 0.04
GTF2F1-204ENST00000594965 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
GTF2F1-204ENST00000594965 C9JCJ5 164 aa15.31■□□□□ 0.04
GTF2F1-204ENST00000594965 PAGE4O60829 102 aa15.31■□□□□ 0.04
GTF2F1-204ENST00000594965 COX8CQ7Z4L0 72 aa15.31■□□□□ 0.04
GTF2F1-204ENST00000594965 ZC2HC1AQ96GY0 325 aa15.31■□□□□ 0.04
GTF2F1-204ENST00000594965 A0A1B0GV50 99 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 PGPEP1LA6NFU8 196 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 FABP5P3A8MUU1 101 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 RS1O15537 224 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 GYPEP15421 78 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 TNP2Q05952 138 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 LGALSLQ3ZCW2 172 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 ZNF876PQ49A33 203 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 Q6ZNX1 250 aa15.3■□□□□ 0.04
GTF2F1-204ENST00000594965 TRBV6-1A0A0K0K1D8 114 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 LOC100131303A0A0U1RQF7 123 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 A0A1W2PPQ1 181 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 PFDN1O60925 122 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 TPT1P13693 172 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 GATA1P15976 413 aaPredicted RBP15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 EIF5AP63241 154 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 CFAP126Q5VTH2 177 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 NEGR1Q7Z3B1 354 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 TCTE3Q8IZS6 198 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 PTH2Q96A98 100 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 FMC1Q96HJ9 113 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 TCEAL7Q9BRU2 100 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 ZFP30Q9Y2G7 519 aa15.29■□□□□ 0.04
GTF2F1-204ENST00000594965 DYNC1H1Q14204 4646 aaKnown RBP15.28■□□□□ 0.04
GTF2F1-204ENST00000594965 NXPH4O95158 308 aa15.28■□□□□ 0.04
GTF2F1-204ENST00000594965 ORM1P02763 201 aa15.28■□□□□ 0.04
GTF2F1-204ENST00000594965 TTC32Q5I0X7 151 aa15.28■□□□□ 0.04
GTF2F1-204ENST00000594965 ZNF506Q5JVG8 444 aa15.28■□□□□ 0.04
GTF2F1-204ENST00000594965 PKHD1P08F94 4074 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms