RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 UPK3BQ9BT76 320 aa13.23□□□□□ -0.29
LTBP4-208ENST00000593738 Q9H8V8 135 aa13.23□□□□□ -0.29
LTBP4-208ENST00000593738 HHLA3Q9XRX5 114 aa13.23□□□□□ -0.29
LTBP4-208ENST00000593738 A0A096LPF7 62 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 A0A0D9SG52 128 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 M0R2P5 195 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 IGHV3-53P01767 116 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 FHL2Q14192 279 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 SMUG1Q53HV7 270 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 MRPS16Q9Y3D3 137 aaKnown RBP13.22□□□□□ -0.29
LTBP4-208ENST00000593738 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
LTBP4-208ENST00000593738 GCGP01275 180 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 IFNA7P01567 189 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 TYMSP04818 313 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 PPT1P50897 306 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 CRYBA4P53673 196 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 PRNTQ86SH4 94 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 STOML3Q8TAV4 291 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
LTBP4-208ENST00000593738 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 A0A1B0GVY2 172 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 FAM74A7A6NL05 159 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
LTBP4-208ENST00000593738 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
LTBP4-208ENST00000593738 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 HIST1H2BAQ96A08 127 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
LTBP4-208ENST00000593738 UMAD1C9J7I0 102 aa13.19□□□□□ -0.3
LTBP4-208ENST00000593738 ZNF80P51504 273 aaPredicted RBP13.19□□□□□ -0.3
LTBP4-208ENST00000593738 UBE2G2P60604 165 aa13.19□□□□□ -0.3
LTBP4-208ENST00000593738 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
LTBP4-208ENST00000593738 TTC32Q5I0X7 151 aa13.19□□□□□ -0.3
LTBP4-208ENST00000593738 TRAV4A0A0B4J268 109 aa13.18□□□□□ -0.3
LTBP4-208ENST00000593738 KANTRA0A1W2PQU2 76 aa13.18□□□□□ -0.3
LTBP4-208ENST00000593738 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
LTBP4-208ENST00000593738 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
LTBP4-208ENST00000593738 ZNF479Q96JC4 524 aa13.18□□□□□ -0.3
LTBP4-208ENST00000593738 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
LTBP4-208ENST00000593738 A0A1W2PPQ1 181 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 PEX7O00628 323 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 FHITP49789 147 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 OR4C5Q8NGB2 326 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 C11orf21Q9P2W6 132 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 ARL2-SNX15V9GYD0 113 aa13.17□□□□□ -0.3
LTBP4-208ENST00000593738 TRAV34A0A0B4J273 112 aa13.16□□□□□ -0.3
LTBP4-208ENST00000593738 BCL2L11O43521 198 aa13.16□□□□□ -0.3
LTBP4-208ENST00000593738 ORM1P02763 201 aa13.16□□□□□ -0.3
LTBP4-208ENST00000593738 SFTA3P0C7M3 94 aa13.16□□□□□ -0.3
LTBP4-208ENST00000593738 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
LTBP4-208ENST00000593738 FABP5P3A8MUU1 101 aa13.15□□□□□ -0.3
LTBP4-208ENST00000593738 CIDEAO60543 219 aa13.15□□□□□ -0.3
LTBP4-208ENST00000593738 BTF3P20290 206 aaKnown RBP13.15□□□□□ -0.3
LTBP4-208ENST00000593738 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.3
LTBP4-208ENST00000593738 NEGR1Q7Z3B1 354 aa13.15□□□□□ -0.3
LTBP4-208ENST00000593738 MBD3L1Q8WWY6 194 aa13.15□□□□□ -0.3
LTBP4-208ENST00000593738 PTH2Q96A98 100 aa13.15□□□□□ -0.3
LTBP4-208ENST00000593738 PCNPQ8WW12 178 aaKnown RBP13.14□□□□□ -0.31
LTBP4-208ENST00000593738 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
LTBP4-208ENST00000593738 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
LTBP4-208ENST00000593738 HECTD4Q9Y4D8 3996 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 C9JCJ5 164 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 ZNF876PQ49A33 203 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 TMUB2Q71RG4 321 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 COX8CQ7Z4L0 72 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 Q86TA4 180 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 C9orf85Q96MD7 179 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 DNAH17Q9UFH2 4485 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 DNAH2Q9P225 4427 aa13.13□□□□□ -0.31
LTBP4-208ENST00000593738 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 K7EQD1 137 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 SIVA1O15304 175 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 PFDN1O60925 122 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 SRIP30626 198 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 FAM213BQ8TBF2 198 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 SFT2D1Q8WV19 159 aa13.12□□□□□ -0.31
LTBP4-208ENST00000593738 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
LTBP4-208ENST00000593738 GYPEP15421 78 aa13.11□□□□□ -0.31
LTBP4-208ENST00000593738 UBE2G1P62253 170 aa13.11□□□□□ -0.31
LTBP4-208ENST00000593738 LGALSLQ3ZCW2 172 aaPredicted RBP13.11□□□□□ -0.31
LTBP4-208ENST00000593738 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
LTBP4-208ENST00000593738 TXNDC17Q9BRA2 123 aa13.11□□□□□ -0.31
LTBP4-208ENST00000593738 RS1O15537 224 aa13.1□□□□□ -0.31
LTBP4-208ENST00000593738 PAGE4O60829 102 aa13.1□□□□□ -0.31
LTBP4-208ENST00000593738 NXPH4O95158 308 aa13.1□□□□□ -0.31
LTBP4-208ENST00000593738 RNASE3P12724 160 aaKnown RBP13.1□□□□□ -0.31
LTBP4-208ENST00000593738 PIK3CD-AS1Q5SR53 167 aa13.1□□□□□ -0.31
LTBP4-208ENST00000593738 IGKV3D-20A0A0C4DH25 116 aa13.09□□□□□ -0.31
LTBP4-208ENST00000593738 S100A9P06702 114 aaKnown RBP13.09□□□□□ -0.31
LTBP4-208ENST00000593738 GATA1P15976 413 aaPredicted RBP13.09□□□□□ -0.31
LTBP4-208ENST00000593738 S100A4P26447 101 aaKnown RBP13.09□□□□□ -0.31
LTBP4-208ENST00000593738 CFAP126Q5VTH2 177 aa13.09□□□□□ -0.31
LTBP4-208ENST00000593738 KRTAP1-5Q9BYS1 174 aa13.09□□□□□ -0.31
LTBP4-208ENST00000593738 FAT2Q9NYQ8 4349 aa13.09□□□□□ -0.31
LTBP4-208ENST00000593738 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms