RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 WFDC1Q9HC57 220 aa9.05□□□□□ -0.96
APOC1-209ENST00000592885 SDF2L1Q9HCN8 221 aa9.05□□□□□ -0.96
APOC1-209ENST00000592885 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
APOC1-209ENST00000592885 NAGKQ9UJ70 344 aa9.05□□□□□ -0.96
APOC1-209ENST00000592885 RPH3ALQ9UNE2 315 aa9.05□□□□□ -0.96
APOC1-209ENST00000592885 CIDEAO60543 219 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
APOC1-209ENST00000592885 RAB2AP61019 212 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 C10orf126Q8N4M7 172 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 OR4C5Q8NGB2 326 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 OR10G9Q8NGN4 311 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 OR10G7Q8NGN6 311 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
APOC1-209ENST00000592885 TREM1Q9NP99 234 aa9.04□□□□□ -0.96
APOC1-209ENST00000592885 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 K7EQM0 130 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 TYMSP04818 313 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 STAG3L2P0CL84 134 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 ARL14EPLP0DKL9 152 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 EVI2AP22794 236 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 TIRAPP58753 221 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 ASB13Q8WXK3 278 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 MSRB1Q9NZV6 116 aa9.03□□□□□ -0.96
APOC1-209ENST00000592885 FBLL1A6NHQ2 334 aaKnown RBP9.02□□□□□ -0.97
APOC1-209ENST00000592885 F6UZH7 168 aa9.02□□□□□ -0.97
APOC1-209ENST00000592885 EIF3GO75821 320 aaKnown RBP eCLIP9.02□□□□□ -0.97
APOC1-209ENST00000592885 MBP02144 154 aa9.02□□□□□ -0.97
APOC1-209ENST00000592885 WFDC10BQ8IUB3 73 aa9.02□□□□□ -0.97
APOC1-209ENST00000592885 SUN5Q8TC36 379 aa9.02□□□□□ -0.97
APOC1-209ENST00000592885 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
APOC1-209ENST00000592885 AQP10Q96PS8 301 aa9.02□□□□□ -0.97
APOC1-209ENST00000592885 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
APOC1-209ENST00000592885 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 GNRH2O43555 120 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 TCRAP04437 139 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 GATA1P15976 413 aaPredicted RBP9.01□□□□□ -0.97
APOC1-209ENST00000592885 GNG5P63218 68 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 SERF2P84101 59 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 RGS21Q2M5E4 152 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 ALG5Q9Y673 324 aa9.01□□□□□ -0.97
APOC1-209ENST00000592885 A0A087WTM6 91 aa9□□□□□ -0.97
APOC1-209ENST00000592885 PTTG1O95997 202 aa9□□□□□ -0.97
APOC1-209ENST00000592885 ZFP69Q49AA0 526 aa9□□□□□ -0.97
APOC1-209ENST00000592885 HSD17B11Q8NBQ5 300 aa9□□□□□ -0.97
APOC1-209ENST00000592885 PTH2Q96A98 100 aa9□□□□□ -0.97
APOC1-209ENST00000592885 TMEM167BQ9NRX6 74 aa9□□□□□ -0.97
APOC1-209ENST00000592885 TAAR5O14804 337 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 HMGB3O15347 200 aaKnown RBP8.99□□□□□ -0.97
APOC1-209ENST00000592885 CXorf1O96002 111 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 CRYGDP07320 174 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 PFN1P07737 140 aaKnown RBP8.99□□□□□ -0.97
APOC1-209ENST00000592885 GCHFRP30047 84 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 PPT1P50897 306 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 RHOHQ15669 191 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 TMEM75Q8N9X5 138 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 RAB24Q969Q5 203 aa8.99□□□□□ -0.97
APOC1-209ENST00000592885 TRBV6-4A0A1B0GX49 114 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 RS1O15537 224 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 ATP6V0CP27449 155 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 ZNF876PQ49A33 203 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 SMUG1Q53HV7 270 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 NHLRC2Q8NBF2 726 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 MED28Q9H204 178 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 TNFSF18Q9UNG2 199 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 PSG8Q9UQ74 426 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 TNFRSF18Q9Y5U5 241 aa8.98□□□□□ -0.97
APOC1-209ENST00000592885 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
APOC1-209ENST00000592885 GGTLC3B5MD39 225 aa8.97□□□□□ -0.97
APOC1-209ENST00000592885 GCGP01275 180 aa8.97□□□□□ -0.97
APOC1-209ENST00000592885 FLI1Q01543 452 aaPredicted RBP8.97□□□□□ -0.97
APOC1-209ENST00000592885 SAPCD1Q5SSQ6 148 aa8.97□□□□□ -0.97
APOC1-209ENST00000592885 Q6ZNX1 250 aa8.97□□□□□ -0.97
APOC1-209ENST00000592885 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
APOC1-209ENST00000592885 EPDR1Q9UM22 224 aa8.97□□□□□ -0.97
APOC1-209ENST00000592885 TRAV8-6A0A0B4J262 113 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 LOC100131303A0A0U1RQF7 123 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 A0A1W2PRE2 83 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 IGLV2-11P01706 119 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 GIPP09681 153 aaPredicted RBP8.96□□□□□ -0.98
APOC1-209ENST00000592885 MGST1P10620 155 aaKnown RBP8.96□□□□□ -0.98
APOC1-209ENST00000592885 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
APOC1-209ENST00000592885 SUMO1P63165 101 aaKnown RBP8.96□□□□□ -0.98
APOC1-209ENST00000592885 PIK3CD-AS1Q5SR53 167 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 CFAP126Q5VTH2 177 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 SLC25A29Q8N8R3 303 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 SGK494Q96LW2 274 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 C11orf21Q9P2W6 132 aa8.96□□□□□ -0.98
APOC1-209ENST00000592885 BORCS7-ASMTA0A0B4J1R7 106 aa8.95□□□□□ -0.98
APOC1-209ENST00000592885 EPM2AB3EWF7 344 aa8.95□□□□□ -0.98
APOC1-209ENST00000592885 ZNF506Q5JVG8 444 aa8.95□□□□□ -0.98
APOC1-209ENST00000592885 PRNTQ86SH4 94 aa8.95□□□□□ -0.98
APOC1-209ENST00000592885 INO80EQ8NBZ0 244 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms