RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TIRAP	P58753	221 aa		12.18	□□□□□ -0.46
CIRBP-238	ENST00000592412	LINC01556	Q5JQF7	62 aa		12.18	□□□□□ -0.46
CIRBP-238	ENST00000592412	THAP6	Q8TBB0	222 aa		12.18	□□□□□ -0.46
CIRBP-238	ENST00000592412	SLC25A31	Q9H0C2	315 aa		12.18	□□□□□ -0.46
CIRBP-238	ENST00000592412	RBAKDN	A6NC62	111 aa		12.17	□□□□□ -0.46
CIRBP-238	ENST00000592412	MPC2	O95563	127 aa		12.17	□□□□□ -0.46
CIRBP-238	ENST00000592412	NHLH2	Q02577	135 aa		12.17	□□□□□ -0.46
CIRBP-238	ENST00000592412	PAXX	Q9BUH6	204 aa		12.17	□□□□□ -0.46
CIRBP-238	ENST00000592412	TRGV11	A0A075B6L2	103 aa		12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412	GATA1	P15976	413 aa	Predicted RBP	12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412	WFDC2	Q14508	124 aa		12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412	TDRG1	Q3Y452	100 aa		12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412		Q6ZSA8	131 aa		12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412		Q9HAA7	133 aa		12.16	□□□□□ -0.46
CIRBP-238	ENST00000592412	IGHV3-16	A0A0C4DH30	117 aa		12.15	□□□□□ -0.46
CIRBP-238	ENST00000592412	GNRH2	O43555	120 aa		12.15	□□□□□ -0.46
CIRBP-238	ENST00000592412	RAN	P62826	216 aa	Known RBP	12.15	□□□□□ -0.46
CIRBP-238	ENST00000592412	FAM159A	Q6UWV7	190 aa		12.15	□□□□□ -0.46
CIRBP-238	ENST00000592412	OR4C5	Q8NGB2	326 aa		12.15	□□□□□ -0.46
CIRBP-238	ENST00000592412	C1QB	P02746	253 aa		12.14	□□□□□ -0.47
CIRBP-238	ENST00000592412	NHLRC2	Q8NBF2	726 aa		12.14	□□□□□ -0.47
CIRBP-238	ENST00000592412	OR5C1	Q8NGR4	320 aa		12.14	□□□□□ -0.47
CIRBP-238	ENST00000592412	MBD2	Q9UBB5	411 aa		12.14	□□□□□ -0.47
CIRBP-238	ENST00000592412	LENEP	Q9Y5L5	61 aa		12.14	□□□□□ -0.47
CIRBP-238	ENST00000592412	PKHD1L1	Q86WI1	4243 aa		12.13	□□□□□ -0.47
CIRBP-238	ENST00000592412	DIRC3	C9JPN6	131 aa		12.13	□□□□□ -0.47
CIRBP-238	ENST00000592412		M0R2P5	195 aa		12.13	□□□□□ -0.47
CIRBP-238	ENST00000592412	SH2D6	Q7Z4S9	175 aa		12.13	□□□□□ -0.47
CIRBP-238	ENST00000592412	NAGK	Q9UJ70	344 aa		12.13	□□□□□ -0.47
CIRBP-238	ENST00000592412	CSN1S1	P47710	185 aa		12.12	□□□□□ -0.47
CIRBP-238	ENST00000592412	PPT1	P50897	306 aa		12.12	□□□□□ -0.47
CIRBP-238	ENST00000592412	LINC00528	Q8N1L1	170 aa		12.12	□□□□□ -0.47
CIRBP-238	ENST00000592412	OR7C2	O60412	319 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	IGHV3-30	P01768	117 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	IGHV3-33	P01772	117 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	TYMS	P04818	313 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	IGHV3-30-3	P0DP02	117 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	IGHV3-30-5	P0DP03	117 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	RPL12	P30050	165 aa	Known RBP	12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412		Q8N3U1	123 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	SLC25A29	Q8N8R3	303 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	TVP23C	Q96ET8	276 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	WDR61	Q9GZS3	305 aa	Known RBP	12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	HSPB11	Q9Y547	144 aa		12.11	□□□□□ -0.47
CIRBP-238	ENST00000592412	PLA2G1B	P04054	148 aa	Known RBP	12.1	□□□□□ -0.47
CIRBP-238	ENST00000592412	UBE2L3	P68036	154 aa	Known RBP	12.1	□□□□□ -0.47
CIRBP-238	ENST00000592412	OR10J3	Q5JRS4	329 aa		12.1	□□□□□ -0.47
CIRBP-238	ENST00000592412	DPPA3	Q6W0C5	159 aa		12.1	□□□□□ -0.47
CIRBP-238	ENST00000592412	TMED6	Q8WW62	240 aa		12.1	□□□□□ -0.47
CIRBP-238	ENST00000592412	EIF3G	O75821	320 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
CIRBP-238	ENST00000592412	GIP	P09681	153 aa	Predicted RBP	12.09	□□□□□ -0.47
CIRBP-238	ENST00000592412	KRTAP10-4	P60372	401 aa	Predicted RBP	12.09	□□□□□ -0.47
CIRBP-238	ENST00000592412	ASB13	Q8WXK3	278 aa		12.09	□□□□□ -0.47
CIRBP-238	ENST00000592412	ATP5S	Q99766	215 aa		12.09	□□□□□ -0.47
CIRBP-238	ENST00000592412	TRAV8-6	A0A0B4J262	113 aa		12.08	□□□□□ -0.48
CIRBP-238	ENST00000592412	FBLL1	A6NHQ2	334 aa	Known RBP	12.08	□□□□□ -0.48
CIRBP-238	ENST00000592412		F6UZH7	168 aa		12.08	□□□□□ -0.48
CIRBP-238	ENST00000592412	LELP1	Q5T871	98 aa		12.08	□□□□□ -0.48
CIRBP-238	ENST00000592412	SMIM3	Q9BZL3	60 aa		12.08	□□□□□ -0.48
CIRBP-238	ENST00000592412	PFN1	P07737	140 aa	Known RBP	12.07	□□□□□ -0.48
CIRBP-238	ENST00000592412	LAGE3	Q14657	143 aa		12.07	□□□□□ -0.48
CIRBP-238	ENST00000592412	CFAP126	Q5VTH2	177 aa		12.07	□□□□□ -0.48
CIRBP-238	ENST00000592412	DEFB104A	Q8WTQ1	72 aa		12.07	□□□□□ -0.48
CIRBP-238	ENST00000592412	HYLS1	Q96M11	299 aa		12.07	□□□□□ -0.48
CIRBP-238	ENST00000592412	TRAV8-1	A0A0A6YYK1	113 aa		12.06	□□□□□ -0.48
CIRBP-238	ENST00000592412	TRAV21	A0A0B4J279	112 aa		12.06	□□□□□ -0.48
CIRBP-238	ENST00000592412	LECT2	O14960	151 aa		12.06	□□□□□ -0.48
CIRBP-238	ENST00000592412	RS1	O15537	224 aa		12.06	□□□□□ -0.48
CIRBP-238	ENST00000592412	KCNIP2	Q9NS61	270 aa		12.06	□□□□□ -0.48
CIRBP-238	ENST00000592412	C11orf21	Q9P2W6	132 aa		12.06	□□□□□ -0.48
CIRBP-238	ENST00000592412	TRBV6-4	A0A1B0GX49	114 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	C17orf112	F2Z3M2	114 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	RHOH	Q15669	191 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	LINC01620	Q4KN68	170 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412		Q5BKY6	102 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	SCGB1C1	Q8TD33	95 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	SDF2L1	Q9HCN8	221 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	OTOR	Q9NRC9	128 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	RPH3AL	Q9UNE2	315 aa		12.05	□□□□□ -0.48
CIRBP-238	ENST00000592412	IGHV3-73	A0A0B4J1V6	119 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	PGP	A6NDG6	321 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	ZNF876P	Q49A33	203 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	KHDC3L	Q587J8	217 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	FFAR4	Q5NUL3	377 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	GOLT1A	Q6ZVE7	132 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	SCX	Q7RTU7	201 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	OR2T35	Q8NGX2	323 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	GTSF1L	Q9H1H1	148 aa		12.04	□□□□□ -0.48
CIRBP-238	ENST00000592412	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	AQP10	Q96PS8	301 aa		12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	PRADC1	Q9BSG0	188 aa		12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	TM2D2	Q9BX73	214 aa		12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	WFDC1	Q9HC57	220 aa		12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	TREM1	Q9NP99	234 aa		12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	BOLA1	Q9Y3E2	137 aa		12.03	□□□□□ -0.48
CIRBP-238	ENST00000592412	FXYD6-FXYD2	A0A087WZ82	144 aa		12.02	□□□□□ -0.49
CIRBP-238	ENST00000592412	ZNF80	P51504	273 aa	Predicted RBP	12.02	□□□□□ -0.49
CIRBP-238	ENST00000592412	GNG5	P63218	68 aa		12.02	□□□□□ -0.49
CIRBP-238	ENST00000592412	ATP6V0E2	Q8NHE4	81 aa		12.02	□□□□□ -0.49

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