RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PPP1R2P9O14990 202 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 RTL8CO15255 209 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 OR10J4P0C629 311 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 AKR1C3P42330 323 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 RANP62826 216 aaKnown RBP6.73□□□□□ -1.33
BRCA1-226ENST00000591534 RHEBQ15382 184 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 CYB561D1Q8N8Q1 229 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 OR4B1Q8NGF8 309 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 SMIM7Q9BQ49 75 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 TMEM208Q9BTX3 173 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 ZFP30Q9Y2G7 519 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 CARHSP1Q9Y2V2 147 aaKnown RBP6.73□□□□□ -1.33
BRCA1-226ENST00000591534 KIAA1109Q2LD37 5005 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 TRBV6-1A0A0K0K1D8 114 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 PGPA6NDG6 321 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 IGKV3-20P01619 116 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 SRP19P09132 144 aaKnown RBP6.72□□□□□ -1.33
BRCA1-226ENST00000591534 HTN3P15516 51 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 GNG4P50150 75 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 CCL20P78556 96 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 RRN3P1Q2M238 152 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 C1orf134Q5TEV5 83 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 FAM222AQ5U5X8 452 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 SLC7A5P1Q8MH63 180 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 C15orf53Q8NAA6 179 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 TVP23CQ96ET8 276 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 Q9H3A6 140 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 EPDR1Q9UM22 224 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 LENEPQ9Y5L5 61 aa6.72□□□□□ -1.33
BRCA1-226ENST00000591534 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 PEX7O00628 323 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 MT-ND4LP03901 98 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 CT45A10P0DMU9 189 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 PYYP10082 97 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 UBE2G2P60604 165 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 DAD1P61803 113 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 C10orf91Q5T1B1 145 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 C15orf54Q8N8G6 183 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM75Q8N9X5 138 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 PCNPQ8WW12 178 aaKnown RBP6.71□□□□□ -1.34
BRCA1-226ENST00000591534 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF331Q9NQX6 463 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-226ENST00000591534 TRAV5A0A0B4J249 113 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 XKRY2A2RUG3 117 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 DUSP14O95147 198 aaKnown RBP6.7□□□□□ -1.34
BRCA1-226ENST00000591534 APOC3P02656 99 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 CEBPGP53567 150 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 FXYD7P58549 80 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 DEFB1P60022 68 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM183BQ1AE95 376 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM78Q5T7P6 136 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 Q6ZR54 194 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 SSX7Q7RTT5 188 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 LINC00477Q96M19 166 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 PPP1R14DQ9NXH3 145 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF586Q9NXT0 402 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 KLF12Q9Y4X4 402 aa6.7□□□□□ -1.34
BRCA1-226ENST00000591534 YTHDF2Q9Y5A9 579 aaKnown RBP6.7□□□□□ -1.34
BRCA1-226ENST00000591534 A0A087WWC5 75 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 A0A0J9YX75 114 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 M0R036 132 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 MRPS12O15235 138 aaKnown RBP6.69□□□□□ -1.34
BRCA1-226ENST00000591534 NDUFB4O95168 129 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 TCRAP04437 139 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 TSPOP30536 169 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 PSG3Q16557 428 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 GDF5OSQ5U4N7 250 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 DAZAP1Q96EP5 407 aaKnown RBP6.69□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 PARLQ9H300 379 aa6.69□□□□□ -1.34
BRCA1-226ENST00000591534 GGTLC3B5MD39 225 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 H3BQ15 152 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 INSP01308 110 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 S100PP25815 95 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 RPL35P42766 123 aaKnown RBP6.68□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF674Q2M3X9 581 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM88Q6PEY1 159 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 BAGE2Q86Y30 109 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 IGF2BP2-AS1Q96M15 143 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 C17orf77Q96MU5 243 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 MLST8Q9BVC4 326 aa6.68□□□□□ -1.34
BRCA1-226ENST00000591534 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 RYR1P21817 5038 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 SOCS3O14543 225 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 ATP5G3P48201 142 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 CCL18P55774 89 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 TIRAPP58753 221 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms