RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TCEAL7Q9BRU2 100 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
VPS4B-205ENST00000591383 TREM1Q9NP99 234 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF492Q9P255 531 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 PSG8Q9UQ74 426 aa4.63□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF705GA8MUZ8 300 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-205ENST00000591383 KLLNB2CW77 178 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 CRXO43186 299 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-205ENST00000591383 MIFP14174 115 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 CRISP2P16562 243 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 MEF2BQ02080 365 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-205ENST00000591383 RRN3P1Q2M238 152 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 MUC21Q5SSG8 566 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF705AQ6ZN79 300 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-205ENST00000591383 C1orf158Q8N1D5 194 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 TMEM256Q8N2U0 113 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 ZFAND2AQ8N6M9 145 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 Q8NAQ8 132 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 NHLRC2Q8NBF2 726 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 CSNK1G2-AS1Q8NCQ2 148 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 FMC1Q96HJ9 113 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 LINC00479Q96M42 142 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 C11orf68Q9H3H3 251 aaKnown RBP4.62□□□□□ -1.67
VPS4B-205ENST00000591383 VAX2Q9UIW0 290 aa4.62□□□□□ -1.67
VPS4B-205ENST00000591383 FBLL1A6NHQ2 334 aaKnown RBP4.61□□□□□ -1.67
VPS4B-205ENST00000591383 H7BYZ3 331 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 PDE6DO43924 150 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 GCGP01275 180 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 PRM2P04554 102 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 TAGLN2P37802 199 aaKnown RBP4.61□□□□□ -1.67
VPS4B-205ENST00000591383 RAB14P61106 215 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 SMUG1Q53HV7 270 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 CENPWQ5EE01 88 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 ARL6IP6Q8N6S5 226 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 OCC1Q8TAD7 63 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 FAM19A4Q96LR4 140 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 C20orf144Q9BQM9 153 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 DERL1Q9BUN8 251 aa4.61□□□□□ -1.67
VPS4B-205ENST00000591383 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
VPS4B-205ENST00000591383 TRAV21A0A0B4J279 112 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 TRBV7-9A0A0J9YWB2 115 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 RBFOX3A6NFN3 312 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 IGLV2-11P01706 119 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 NMBP08949 121 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 MGST1P10620 155 aaKnown RBP4.6□□□□□ -1.67
VPS4B-205ENST00000591383 RPL35P42766 123 aaKnown RBP4.6□□□□□ -1.67
VPS4B-205ENST00000591383 TAS2R60P59551 318 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 SNRPEP62304 92 aaKnown RBP4.6□□□□□ -1.67
VPS4B-205ENST00000591383 UBE2V1Q13404 147 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF506Q5JVG8 444 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 PRR27Q6MZM9 219 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 Q6ZQT7 251 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF767PQ75MW2 155 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 TMEM263Q8WUH6 116 aaKnown RBP4.6□□□□□ -1.67
VPS4B-205ENST00000591383 C11orf52Q96A22 123 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 TVP23CQ96ET8 276 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 C16orf74Q96GX8 76 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 ZC2HC1AQ96GY0 325 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 TXNDC17Q9BRA2 123 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 PYGO2Q9BRQ0 406 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 MED9Q9NWA0 146 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 CELA1Q9UNI1 258 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 LENEPQ9Y5L5 61 aa4.6□□□□□ -1.67
VPS4B-205ENST00000591383 IGHV1OR15-1A0A075B7D0 117 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 TMEM189A5PLL7 270 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 SMIM9A6NGZ8 99 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 SNURFLB1AK76 121 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 M0R036 132 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 SH2D1AO60880 128 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 LTAP01374 205 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 S100A9P06702 114 aaKnown RBP4.59□□□□□ -1.67
VPS4B-205ENST00000591383 HTN3P15516 51 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 AZU1P20160 251 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 GNG4P50150 75 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF80P51504 273 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-205ENST00000591383 NANOS2P60321 138 aaKnown RBP4.59□□□□□ -1.67
VPS4B-205ENST00000591383 ZNF415Q09FC8 603 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 TMEM183BQ1AE95 376 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 SAPCD1Q5SSQ6 148 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 FAM222AQ5U5X8 452 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 Q6AWC8 147 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 ZFAND6Q6FIF0 208 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 FAM159AQ6UWV7 190 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 TMEM183AQ8IXX5 376 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 EIF4E3Q8N5X7 224 aaKnown RBP4.59□□□□□ -1.67
VPS4B-205ENST00000591383 FAM210AQ96ND0 272 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 EDA2RQ9HAV5 297 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 SDF2L1Q9HCN8 221 aa4.59□□□□□ -1.67
VPS4B-205ENST00000591383 TIMM8BQ9Y5J9 83 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-205ENST00000591383 ALMS1Q8TCU4 4167 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 TMSB15BA0A087X1C1 80 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 TRBV6-1A0A0K0K1D8 114 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 TEX48A0A1B0GUV7 120 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 RAB19A4D1S5 217 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 PFN1P07737 140 aaKnown RBP4.58□□□□□ -1.68
VPS4B-205ENST00000591383 FAM162BQ5T6X4 162 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 BAGE2Q86Y30 109 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 LYPD6BQ8NI32 183 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 C11orf45Q8TAV5 145 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 RNASE8Q8TDE3 154 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms