RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 SMUG1Q53HV7 270 aa16.16■□□□□ 0.18
CLPTM1-212ENST00000591304 IGHV3-16A0A0C4DH30 117 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 NBDYA0A0U1RRE5 68 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 MAP1LC3B2A6NCE7 125 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 PRSS29PA6NIE9 313 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 M0R2P5 195 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 PRNTQ86SH4 94 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 HIST1H2BAQ96A08 127 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 UPK3BQ9BT76 320 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 MAP1LC3BQ9GZQ8 125 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 HHLA3Q9XRX5 114 aa16.15■□□□□ 0.18
CLPTM1-212ENST00000591304 A0A096LPF7 62 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 KANTRA0A1W2PQU2 76 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 UMAD1C9J7I0 102 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 GNRH2O43555 120 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 GCGP01275 180 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 IGHV3-53P01767 116 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 TYMSP04818 313 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 PFN1P07737 140 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 SEC11BP0C7V7 166 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 EIF5AP63241 154 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 ESRGQ1W209 222 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 Q9H8V8 135 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 ICOSQ9Y6W8 199 aa16.14■□□□□ 0.17
CLPTM1-212ENST00000591304 TRGV4A0A0C4DH28 118 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 FAM74A7A6NL05 159 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 CRYBA4P53673 196 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 FGF8P55075 233 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 UBE2G2P60604 165 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 FHL2Q14192 279 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 C8orf49Q96NF6 230 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 TCEAL7Q9BRU2 100 aa16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 MRPS16Q9Y3D3 137 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-212ENST00000591304 BCL2L11O43521 198 aa16.12■□□□□ 0.17
CLPTM1-212ENST00000591304 OR11H4Q8NGC9 324 aa16.12■□□□□ 0.17
CLPTM1-212ENST00000591304 TRAV4A0A0B4J268 109 aa16.11■□□□□ 0.17
CLPTM1-212ENST00000591304 PEX7O00628 323 aa16.11■□□□□ 0.17
CLPTM1-212ENST00000591304 MRPL23Q16540 153 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-212ENST00000591304 TTC32Q5I0X7 151 aa16.11■□□□□ 0.17
CLPTM1-212ENST00000591304 ZNF471Q9BX82 626 aaPredicted RBP16.11■□□□□ 0.17
CLPTM1-212ENST00000591304 ARL2-SNX15V9GYD0 113 aa16.11■□□□□ 0.17
CLPTM1-212ENST00000591304 DNAH2Q9P225 4427 aa16.1■□□□□ 0.17
CLPTM1-212ENST00000591304 FHITP49789 147 aa16.1■□□□□ 0.17
CLPTM1-212ENST00000591304 ZNF80P51504 273 aaPredicted RBP16.1■□□□□ 0.17
CLPTM1-212ENST00000591304 DPPA3Q6W0C5 159 aa16.09■□□□□ 0.17
CLPTM1-212ENST00000591304 OR4C5Q8NGB2 326 aa16.09■□□□□ 0.17
CLPTM1-212ENST00000591304 A0A1W2PPQ1 181 aa16.08■□□□□ 0.16
CLPTM1-212ENST00000591304 PFDN1O60925 122 aa16.08■□□□□ 0.16
CLPTM1-212ENST00000591304 ORM1P02763 201 aa16.08■□□□□ 0.16
CLPTM1-212ENST00000591304 C6orf223Q8N319 242 aa16.08■□□□□ 0.16
CLPTM1-212ENST00000591304 ZNF479Q96JC4 524 aa16.08■□□□□ 0.16
CLPTM1-212ENST00000591304 LINC00479Q96M42 142 aa16.08■□□□□ 0.16
CLPTM1-212ENST00000591304 TRAV34A0A0B4J273 112 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 A0A1B0GVY2 172 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 FABP5P3A8MUU1 101 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 CIDEAO60543 219 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 SFTA3P0C7M3 94 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 PCNPQ8WW12 178 aaKnown RBP16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 MBD3L1Q8WWY6 194 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 ZFP30Q9Y2G7 519 aa16.07■□□□□ 0.16
CLPTM1-212ENST00000591304 BTF3P20290 206 aaKnown RBP16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 CST9LP1Q5W188 147 aa16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 NEGR1Q7Z3B1 354 aa16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 Q86TA4 180 aa16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 SFT2D1Q8WV19 159 aa16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 FMC1Q96HJ9 113 aa16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 C11orf21Q9P2W6 132 aa16.06■□□□□ 0.16
CLPTM1-212ENST00000591304 C9JCJ5 164 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 TPT1P13693 172 aaKnown RBP16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 UBE2G1P62253 170 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 LGALSLQ3ZCW2 172 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 ZNF876PQ49A33 203 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 TMUB2Q71RG4 321 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 FAM213BQ8TBF2 198 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 PTH2Q96A98 100 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 HECTD4Q9Y4D8 3996 aa16.05■□□□□ 0.16
CLPTM1-212ENST00000591304 DNAH17Q9UFH2 4485 aa16.04■□□□□ 0.16
CLPTM1-212ENST00000591304 SRIP30626 198 aa16.04■□□□□ 0.16
CLPTM1-212ENST00000591304 C9orf85Q96MD7 179 aa16.04■□□□□ 0.16
CLPTM1-212ENST00000591304 FAT2Q9NYQ8 4349 aa16.03■□□□□ 0.16
CLPTM1-212ENST00000591304 TRBV6-1A0A0K0K1D8 114 aa16.03■□□□□ 0.16
CLPTM1-212ENST00000591304 COX8CQ7Z4L0 72 aa16.03■□□□□ 0.16
CLPTM1-212ENST00000591304 TXNDC17Q9BRA2 123 aa16.03■□□□□ 0.16
CLPTM1-212ENST00000591304 K7EQD1 137 aa16.02■□□□□ 0.16
CLPTM1-212ENST00000591304 EIF5AL1Q6IS14 154 aaKnown RBP16.02■□□□□ 0.16
CLPTM1-212ENST00000591304 LYPD5Q6UWN5 251 aa16.02■□□□□ 0.16
CLPTM1-212ENST00000591304 SH2D6Q7Z4S9 175 aa16.02■□□□□ 0.16
CLPTM1-212ENST00000591304 SIVA1O15304 175 aa16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 PAGE4O60829 102 aa16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 S100A9P06702 114 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 H2AFB1P0C5Y9 115 aa16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 GYPEP15421 78 aa16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 S100A4P26447 101 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 PIK3CD-AS1Q5SR53 167 aa16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 TCTE3Q8IZS6 198 aa16.01■□□□□ 0.15
CLPTM1-212ENST00000591304 IGKV3D-20A0A0C4DH25 116 aa16■□□□□ 0.15
CLPTM1-212ENST00000591304 RNASE3P12724 160 aaKnown RBP16■□□□□ 0.15
CLPTM1-212ENST00000591304 RS1O15537 224 aa15.99■□□□□ 0.15
CLPTM1-212ENST00000591304 GATA1P15976 413 aaPredicted RBP15.99■□□□□ 0.15
CLPTM1-212ENST00000591304 ASIPP42127 132 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms