RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 FAM229AH3BQW9 127 aa17.22■□□□□ 0.35
CAPNS1-211ENST00000590874 RANP62826 216 aaKnown RBP17.22■□□□□ 0.35
CAPNS1-211ENST00000590874 FLG2Q5D862 2391 aaPredicted RBP17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 TRGV11A0A075B6L2 103 aa17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 TRAV4A0A0B4J268 109 aa17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 CSN1S1P47710 185 aa17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 Q5BKY6 102 aa17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 FAM159AQ6UWV7 190 aa17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 Q6ZSN1 163 aa17.21■□□□□ 0.35
CAPNS1-211ENST00000590874 LRRC37A5PQ49AS3 106 aa17.2■□□□□ 0.34
CAPNS1-211ENST00000590874 OR11H4Q8NGC9 324 aa17.2■□□□□ 0.34
CAPNS1-211ENST00000590874 TMEM70Q9BUB7 260 aa17.2■□□□□ 0.34
CAPNS1-211ENST00000590874 OR7C2O60412 319 aa17.19■□□□□ 0.34
CAPNS1-211ENST00000590874 WDR61Q9GZS3 305 aaKnown RBP17.19■□□□□ 0.34
CAPNS1-211ENST00000590874 NAGKQ9UJ70 344 aa17.19■□□□□ 0.34
CAPNS1-211ENST00000590874 FXYD6-FXYD2A0A087WZ82 144 aa17.18■□□□□ 0.34
CAPNS1-211ENST00000590874 DIRC3C9JPN6 131 aa17.18■□□□□ 0.34
CAPNS1-211ENST00000590874 PSCAO43653 123 aa17.18■□□□□ 0.34
CAPNS1-211ENST00000590874 NKX2-5P52952 324 aaPredicted RBP17.18■□□□□ 0.34
CAPNS1-211ENST00000590874 OR4C5Q8NGB2 326 aa17.18■□□□□ 0.34
CAPNS1-211ENST00000590874 MBD2Q9UBB5 411 aa17.18■□□□□ 0.34
CAPNS1-211ENST00000590874 IGHV3-38A0A0C4DH36 116 aa17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 UBE2L3P68036 154 aaKnown RBP17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 TDRG1Q3Y452 100 aa17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 C9orf62Q8N4C0 152 aa17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 NTN5Q8WTR8 489 aaPredicted RBP17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 KCNIP2Q9NS61 270 aa17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 SRRM2Q9UQ35 2752 aaKnown RBP17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 LENEPQ9Y5L5 61 aa17.17■□□□□ 0.34
CAPNS1-211ENST00000590874 GNRH2O43555 120 aa17.16■□□□□ 0.34
CAPNS1-211ENST00000590874 OR5AC2Q9NZP5 309 aa17.16■□□□□ 0.34
CAPNS1-211ENST00000590874 IGHV3-16A0A0C4DH30 117 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 M0R2P5 195 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 PPT1P50897 306 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 TIRAPP58753 221 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 LINC01556Q5JQF7 62 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 Q8N814 137 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 NHLRC2Q8NBF2 726 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 FAM30AQ9NZY2 134 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 TNFSF18Q9UNG2 199 aa17.15■□□□□ 0.34
CAPNS1-211ENST00000590874 H0YIZ8 118 aa17.14■□□□□ 0.33
CAPNS1-211ENST00000590874 ARPC5O15511 151 aa17.14■□□□□ 0.33
CAPNS1-211ENST00000590874 ZNF345Q14585 488 aa17.14■□□□□ 0.33
CAPNS1-211ENST00000590874 SH2D6Q7Z4S9 175 aa17.14■□□□□ 0.33
CAPNS1-211ENST00000590874 IBA57-AS1B1ANH7 110 aa17.13■□□□□ 0.33
CAPNS1-211ENST00000590874 GATA1P15976 413 aaPredicted RBP17.13■□□□□ 0.33
CAPNS1-211ENST00000590874 INO80EQ8NBZ0 244 aaPredicted RBP17.13■□□□□ 0.33
CAPNS1-211ENST00000590874 TMED6Q8WW62 240 aa17.13■□□□□ 0.33
CAPNS1-211ENST00000590874 Q9HAA7 133 aa17.13■□□□□ 0.33
CAPNS1-211ENST00000590874 HSPB11Q9Y547 144 aa17.13■□□□□ 0.33
CAPNS1-211ENST00000590874 A0A0D9SG52 128 aa17.12■□□□□ 0.33
CAPNS1-211ENST00000590874 TYMSP04818 313 aa17.12■□□□□ 0.33
CAPNS1-211ENST00000590874 LGALSLQ3ZCW2 172 aaPredicted RBP17.12■□□□□ 0.33
CAPNS1-211ENST00000590874 DNAH8Q96JB1 4490 aa17.12■□□□□ 0.33
CAPNS1-211ENST00000590874 C17orf112F2Z3M2 114 aa17.11■□□□□ 0.33
CAPNS1-211ENST00000590874 EIF3GO75821 320 aaKnown RBP eCLIP17.11■□□□□ 0.33
CAPNS1-211ENST00000590874 RPH3ALQ9UNE2 315 aa17.11■□□□□ 0.33
CAPNS1-211ENST00000590874 F6UZH7 168 aa17.1■□□□□ 0.33
CAPNS1-211ENST00000590874 KHDC3LQ587J8 217 aa17.1■□□□□ 0.33
CAPNS1-211ENST00000590874 AQP10Q96PS8 301 aa17.1■□□□□ 0.33
CAPNS1-211ENST00000590874 RNF222A6NCQ9 220 aa17.09■□□□□ 0.33
CAPNS1-211ENST00000590874 J3QL48 77 aa17.09■□□□□ 0.33
CAPNS1-211ENST00000590874 FFAR4Q5NUL3 377 aa17.09■□□□□ 0.33
CAPNS1-211ENST00000590874 KCNRGQ8N5I3 272 aa17.09■□□□□ 0.33
CAPNS1-211ENST00000590874 TVP23CQ96ET8 276 aa17.09■□□□□ 0.33
CAPNS1-211ENST00000590874 TRAV8-6A0A0B4J262 113 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 TRAV21A0A0B4J279 112 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 IGHV3-30P01768 117 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 IGHV3-33P01772 117 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 IGHV3-30-3P0DP02 117 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 IGHV3-30-5P0DP03 117 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 OR10J3Q5JRS4 329 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 SLC25A29Q8N8R3 303 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 ATP5SQ99766 215 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 OTORQ9NRC9 128 aa17.08■□□□□ 0.32
CAPNS1-211ENST00000590874 PGPA6NDG6 321 aa17.07■□□□□ 0.32
CAPNS1-211ENST00000590874 GOLT1AQ6ZVE7 132 aa17.07■□□□□ 0.32
CAPNS1-211ENST00000590874 SDF2L1Q9HCN8 221 aa17.07■□□□□ 0.32
CAPNS1-211ENST00000590874 TRAV8-1A0A0A6YYK1 113 aa17.06■□□□□ 0.32
CAPNS1-211ENST00000590874 FBLL1A6NHQ2 334 aaKnown RBP17.06■□□□□ 0.32
CAPNS1-211ENST00000590874 PFN1P07737 140 aaKnown RBP17.06■□□□□ 0.32
CAPNS1-211ENST00000590874 TAS2R45P59539 299 aa17.06■□□□□ 0.32
CAPNS1-211ENST00000590874 TMUB2Q71RG4 321 aa17.06■□□□□ 0.32
CAPNS1-211ENST00000590874 CMTM2Q8TAZ6 248 aa17.06■□□□□ 0.32
CAPNS1-211ENST00000590874 RPL12P30050 165 aaKnown RBP17.05■□□□□ 0.32
CAPNS1-211ENST00000590874 WFDC2Q14508 124 aa17.05■□□□□ 0.32
CAPNS1-211ENST00000590874 TREM1Q9NP99 234 aa17.05■□□□□ 0.32
CAPNS1-211ENST00000590874 BOLA1Q9Y3E2 137 aa17.05■□□□□ 0.32
CAPNS1-211ENST00000590874 KANTRA0A1W2PQU2 76 aa17.04■□□□□ 0.32
CAPNS1-211ENST00000590874 DPPA3Q6W0C5 159 aa17.04■□□□□ 0.32
CAPNS1-211ENST00000590874 IGHV3-73A0A0B4J1V6 119 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 BCL2L11O43521 198 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 RHOHQ15669 191 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 ZNF876PQ49A33 203 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 LELP1Q5T871 98 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 CFAP126Q5VTH2 177 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 KCNS1Q96KK3 526 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 PRADC1Q9BSG0 188 aa17.03■□□□□ 0.32
CAPNS1-211ENST00000590874 TRBV6-4A0A1B0GX49 114 aa17.02■□□□□ 0.32
CAPNS1-211ENST00000590874 TAAR5O14804 337 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms