RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
RETREG3-210ENST00000590541 TNFSF18Q9UNG2 199 aa11.77□□□□□ -0.53
RETREG3-210ENST00000590541 TRGV11A0A075B6L2 103 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 NXPH4O95158 308 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 ARL14EPLP0DKL9 152 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 TDRG1Q3Y452 100 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 SUN5Q8TC36 379 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 RAB24Q969Q5 203 aa11.76□□□□□ -0.53
RETREG3-210ENST00000590541 K7EQM0 130 aa11.75□□□□□ -0.53
RETREG3-210ENST00000590541 RGS21Q2M5E4 152 aa11.75□□□□□ -0.53
RETREG3-210ENST00000590541 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
RETREG3-210ENST00000590541 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
RETREG3-210ENST00000590541 ACTR3CQ9C0K3 210 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-210ENST00000590541 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
RETREG3-210ENST00000590541 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
RETREG3-210ENST00000590541 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
RETREG3-210ENST00000590541 CXorf1O96002 111 aa11.74□□□□□ -0.53
RETREG3-210ENST00000590541 Q6ZQT7 251 aa11.74□□□□□ -0.53
RETREG3-210ENST00000590541 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
RETREG3-210ENST00000590541 RPH3ALQ9UNE2 315 aa11.74□□□□□ -0.53
RETREG3-210ENST00000590541 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
RETREG3-210ENST00000590541 KRTAP29-1A8MX34 341 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-210ENST00000590541 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
RETREG3-210ENST00000590541 PAX4O43316 350 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 EIF3GO75821 320 aaKnown RBP eCLIP11.73□□□□□ -0.53
RETREG3-210ENST00000590541 GCHFRP30047 84 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 Q5BKY6 102 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 MUC21Q5SSG8 566 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 OR2T35Q8NGX2 323 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 RASL10AQ92737 203 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 KCNS1Q96KK3 526 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
RETREG3-210ENST00000590541 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
RETREG3-210ENST00000590541 DNAH8Q96JB1 4490 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 RNF222A6NCQ9 220 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 TAAR5O14804 337 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 IQCF2Q8IXL9 164 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
RETREG3-210ENST00000590541 TCRAP04437 139 aa11.71□□□□□ -0.53
RETREG3-210ENST00000590541 TMEM70Q9BUB7 260 aa11.71□□□□□ -0.53
RETREG3-210ENST00000590541 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.53
RETREG3-210ENST00000590541 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
RETREG3-210ENST00000590541 CRYBA4P53673 196 aa11.7□□□□□ -0.54
RETREG3-210ENST00000590541 MRPL23Q16540 153 aaKnown RBP11.7□□□□□ -0.54
RETREG3-210ENST00000590541 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
RETREG3-210ENST00000590541 SH3BGRL3Q9H299 93 aa11.7□□□□□ -0.54
RETREG3-210ENST00000590541 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
RETREG3-210ENST00000590541 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 M0R2P5 195 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
RETREG3-210ENST00000590541 GNG5P63218 68 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 FHL2Q14192 279 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 LYPD5Q6UWN5 251 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-210ENST00000590541 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
RETREG3-210ENST00000590541 CTXND1A0A1B0GTU2 59 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 IGHV3-53P01767 116 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 ZFP69Q49AA0 526 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 CYB561D1Q8N8Q1 229 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 LY96Q9Y6Y9 160 aa11.68□□□□□ -0.54
RETREG3-210ENST00000590541 TRAV9-2A0A087WT02 112 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 IGLV5-52A0A0A0MRZ9 124 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 TRAV4A0A0B4J268 109 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 F6UZH7 168 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 ORM1P02763 201 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 FLI1Q01543 452 aaPredicted RBP11.67□□□□□ -0.54
RETREG3-210ENST00000590541 AKR1C8PQ5T2L2 129 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 SERTAD4-AS1Q5TG53 156 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 TMEM75Q8N9X5 138 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 FAM30AQ9NZY2 134 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
RETREG3-210ENST00000590541 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
RETREG3-210ENST00000590541 GNRH2O43555 120 aa11.66□□□□□ -0.54
RETREG3-210ENST00000590541 CIDEAO60543 219 aa11.66□□□□□ -0.54
RETREG3-210ENST00000590541 PFN1P07737 140 aaKnown RBP11.66□□□□□ -0.54
RETREG3-210ENST00000590541 SMUG1Q53HV7 270 aa11.66□□□□□ -0.54
RETREG3-210ENST00000590541 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
RETREG3-210ENST00000590541 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
RETREG3-210ENST00000590541 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
RETREG3-210ENST00000590541 TYMSP04818 313 aa11.65□□□□□ -0.54
RETREG3-210ENST00000590541 PPT1P50897 306 aa11.65□□□□□ -0.54
RETREG3-210ENST00000590541 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
RETREG3-210ENST00000590541 PCNPQ8WW12 178 aaKnown RBP11.65□□□□□ -0.54
RETREG3-210ENST00000590541 ZNF479Q96JC4 524 aa11.65□□□□□ -0.54
RETREG3-210ENST00000590541 C9JCJ5 164 aa11.64□□□□□ -0.55
RETREG3-210ENST00000590541 G3V3Q6 166 aa11.64□□□□□ -0.55
RETREG3-210ENST00000590541 ARPC5O15511 151 aa11.64□□□□□ -0.55
RETREG3-210ENST00000590541 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
RETREG3-210ENST00000590541 SRIP30626 198 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms