RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SAMD10Q9BYL1 202 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 ENY2Q9NPA8 101 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 KLF12Q9Y4X4 402 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 LINC00312Q9Y6C7 94 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 IGHV3-72A0A0B4J1Y9 119 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 TEX50A0A1B0GTY4 177 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 J3QR06 171 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 M0R2N4 97 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 HYPMO75409 117 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 IGHV3-7P01780 117 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 C3orf79P0CE67 100 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 CT45A6P0DMU7 189 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 CT45A5P0DMU8 189 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 CT45A7P0DMV0 189 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 LINC00311Q8N616 119 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 TMEM167AQ8TBQ9 72 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 C18orf32Q8TCD1 76 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 ORAOV1Q8WV07 137 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 GRAMD2BQ96HH9 432 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 CHRDL1Q9BU40 450 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 NDUFA4L2Q9NRX3 87 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 NAT8BQ9UHF3 227 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 PAM16Q9Y3D7 125 aa5.68□□□□□ -1.5
SMAD4-209ENST00000589941 SRRM4A7MD48 611 aaKnown RBP5.67□□□□□ -1.5
SMAD4-209ENST00000589941 C16orf90A8MZG2 172 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 H0YJW9 148 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 CRXO43186 299 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-209ENST00000589941 CNIH1O95406 144 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 IGHV3-11P01762 117 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 APCSP02743 223 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 CRYGCP07315 174 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 PRSS2P07478 247 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 LGALS1P09382 135 aaKnown RBP5.67□□□□□ -1.5
SMAD4-209ENST00000589941 G0S2P27469 103 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 SRIP30626 198 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 REG1BP48304 166 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF137PP52743 207 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 MEF2CQ06413 473 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-209ENST00000589941 SPATA45Q537H7 98 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 IBA57Q5T440 356 aaKnown RBP5.67□□□□□ -1.5
SMAD4-209ENST00000589941 FAM162BQ5T6X4 162 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 OR1L4Q8NGR5 311 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 LEAP2Q969E1 77 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 RPEQ96AT9 228 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 KRTAP1-5Q9BYS1 174 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 RNASE7Q9H1E1 156 aaKnown RBP5.67□□□□□ -1.5
SMAD4-209ENST00000589941 SLC35D1Q9NTN3 355 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF492Q9P255 531 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 AGRNO00468 2067 aa5.67□□□□□ -1.5
SMAD4-209ENST00000589941 IGKV1D-37A0A075B6S9 117 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 TRBV6-1A0A0K0K1D8 114 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 A0A1W2PN81 502 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 hADV38S2A0JD32 116 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 FAM231BA6NCW3 169 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 C2orf70A6NJV1 201 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 NCBP2LA6PVI3 153 aaKnown RBP5.66□□□□□ -1.5
SMAD4-209ENST00000589941 OOSP1A8MZH6 123 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 PEX7O00628 323 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 SAA1P0DJI8 122 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-209ENST00000589941 INAFM2P0DMQ5 153 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 CEACAM3P40198 252 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 RAB9AP51151 201 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 PLP1P60201 277 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 RPS20P60866 119 aaKnown RBP5.66□□□□□ -1.5
SMAD4-209ENST00000589941 KRTDAPP60985 99 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 LTC4SQ16873 150 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 GDF5OSQ5U4N7 250 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 GATD1Q8NB37 220 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 OR9G1Q8NH87 305 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 FXYD5Q96DB9 178 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 C18orf15Q96N68 181 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 ALKBH7Q9BT30 221 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF430Q9H8G1 570 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-209ENST00000589941 DNAJC4Q9NNZ3 241 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 APLNQ9ULZ1 77 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
SMAD4-209ENST00000589941 AMMECR1Q9Y4X0 333 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-209ENST00000589941 TRAV9-2A0A087WT02 112 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 ATP6V0E1O15342 81 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 OR7C2O60412 319 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 RBMY1CP0DJD4 496 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 MYOD1P15172 320 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 TSPOP30536 169 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 UBE2L3P68036 154 aaKnown RBP5.65□□□□□ -1.5
SMAD4-209ENST00000589941 SLAQ13239 276 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 MMDQ15546 238 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 PATE2Q6UY27 113 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 MOB3BQ86TA1 216 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 PDPNQ86YL7 162 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 STPG4Q8N801 248 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 NHLRC2Q8NBF2 726 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 STXBP6Q8NFX7 210 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF331Q9NQX6 463 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-209ENST00000589941 CBY1Q9Y3M2 126 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms