RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 FOXA3P55318 350 aaPredicted RBP12.83□□□□□ -0.36
CXXC1-212ENST00000589940 FXYD7P58549 80 aa12.83□□□□□ -0.36
CXXC1-212ENST00000589940 ZNF575Q86XF7 245 aa12.83□□□□□ -0.36
CXXC1-212ENST00000589940 RAB5AP20339 215 aa12.82□□□□□ -0.36
CXXC1-212ENST00000589940 ZMAT5Q9UDW3 170 aaKnown RBP12.82□□□□□ -0.36
CXXC1-212ENST00000589940 NAGKQ9UJ70 344 aa12.82□□□□□ -0.36
CXXC1-212ENST00000589940 CRXO43186 299 aaPredicted RBP12.82□□□□□ -0.36
CXXC1-212ENST00000589940 LINC00518Q8N0U6 118 aa12.82□□□□□ -0.36
CXXC1-212ENST00000589940 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
CXXC1-212ENST00000589940 DEFB125Q8N687 156 aa12.81□□□□□ -0.36
CXXC1-212ENST00000589940 TYMSP04818 313 aa12.81□□□□□ -0.36
CXXC1-212ENST00000589940 OXLD1Q5BKU9 147 aa12.81□□□□□ -0.36
CXXC1-212ENST00000589940 MUC21Q5SSG8 566 aa12.81□□□□□ -0.36
CXXC1-212ENST00000589940 PGLYRP4Q96LB8 373 aa12.81□□□□□ -0.36
CXXC1-212ENST00000589940 GRIFINA4D1Z8 144 aa12.8□□□□□ -0.36
CXXC1-212ENST00000589940 SPINK4O60575 86 aa12.8□□□□□ -0.36
CXXC1-212ENST00000589940 AMBPP02760 352 aa12.8□□□□□ -0.36
CXXC1-212ENST00000589940 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
CXXC1-212ENST00000589940 IGLC6P0CF74 106 aa12.79□□□□□ -0.36
CXXC1-212ENST00000589940 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
CXXC1-212ENST00000589940 TPPP3Q9BW30 176 aa12.79□□□□□ -0.36
CXXC1-212ENST00000589940 TDRG1Q3Y452 100 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 MRPL54Q6P161 138 aaKnown RBP12.78□□□□□ -0.36
CXXC1-212ENST00000589940 FER1L6-AS1Q8NA97 138 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 KCNS1Q96KK3 526 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 INSP01308 110 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 RBMY1A1P0DJD3 496 aaKnown RBP12.78□□□□□ -0.36
CXXC1-212ENST00000589940 RBMY1CP0DJD4 496 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 RPS10P46783 165 aaKnown RBP12.78□□□□□ -0.36
CXXC1-212ENST00000589940 RBMY1FQ15415 496 aaKnown RBP12.78□□□□□ -0.36
CXXC1-212ENST00000589940 ATP5L2Q7Z4Y8 100 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 Q8N1Y9 231 aa12.78□□□□□ -0.36
CXXC1-212ENST00000589940 RPL35AP18077 110 aaKnown RBP12.77□□□□□ -0.36
CXXC1-212ENST00000589940 CTRLP40313 264 aa12.77□□□□□ -0.36
CXXC1-212ENST00000589940 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.36
CXXC1-212ENST00000589940 C20orf144Q9BQM9 153 aa12.77□□□□□ -0.36
CXXC1-212ENST00000589940 SRD5A3Q9H8P0 318 aa12.77□□□□□ -0.36
CXXC1-212ENST00000589940 XCL2Q9UBD3 114 aa12.77□□□□□ -0.36
CXXC1-212ENST00000589940 EGFEM1PQ0D2K5 195 aa12.77□□□□□ -0.37
CXXC1-212ENST00000589940 IGHV1OR15-1A0A075B7D0 117 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 A0A1B0GUT8 65 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
CXXC1-212ENST00000589940 ARMS2P0C7Q2 107 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 ASIPP42127 132 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 BORCS7Q96B45 105 aa12.76□□□□□ -0.37
CXXC1-212ENST00000589940 DNAH3Q8TD57 4116 aa12.75□□□□□ -0.37
CXXC1-212ENST00000589940 A0A1B0GXF2 115 aa12.75□□□□□ -0.37
CXXC1-212ENST00000589940 F2Z2F3 143 aa12.75□□□□□ -0.37
CXXC1-212ENST00000589940 GNRH2O43555 120 aa12.75□□□□□ -0.37
CXXC1-212ENST00000589940 DNLZQ5SXM8 178 aa12.75□□□□□ -0.37
CXXC1-212ENST00000589940 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
CXXC1-212ENST00000589940 S100A4P26447 101 aaKnown RBP12.74□□□□□ -0.37
CXXC1-212ENST00000589940 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 SSBP4Q9BWG4 385 aaPredicted RBP12.74□□□□□ -0.37
CXXC1-212ENST00000589940 H3BVH4 76 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 OR5AL1P0C617 328 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 KRTAP10-11P60412 298 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 HBBP68871 147 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 COX19Q49B96 90 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 C1QTNF4Q9BXJ3 329 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 CNFNQ9BYD5 112 aa12.74□□□□□ -0.37
CXXC1-212ENST00000589940 SNAI2O43623 268 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 RIGQ13278 110 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 MED14OSP0DP75 135 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 CAMPP49913 170 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 GNB1LQ9BYB4 327 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 TP53TG3Q9ULZ0 132 aa12.73□□□□□ -0.37
CXXC1-212ENST00000589940 MUC21A0A0G2JKD1 596 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 MUC21A0A140T8X8 626 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 A0A1B0GW15 77 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 TMEM256Q8N2U0 113 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 LINC01587Q99440 93 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 LINC00467Q9BRT7 94 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 CBY3A6NI87 242 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 G3V4G9 280 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 TRGC2P03986 189 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 RNASE3P12724 160 aaKnown RBP12.72□□□□□ -0.37
CXXC1-212ENST00000589940 TMEM136Q6ZRR5 245 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 TMEM208Q9BTX3 173 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 CSTL1Q9H114 145 aa12.72□□□□□ -0.37
CXXC1-212ENST00000589940 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 IGHV3-16A0A0C4DH30 117 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 MT-ND6P03923 174 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 RAB4BP61018 213 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 SCRT2Q9NQ03 307 aa12.71□□□□□ -0.37
CXXC1-212ENST00000589940 LOC102724200A0A096LPH7 203 aaPredicted RBP12.7□□□□□ -0.38
CXXC1-212ENST00000589940 S100A8P05109 93 aa12.7□□□□□ -0.38
CXXC1-212ENST00000589940 SSTP61278 116 aa12.7□□□□□ -0.38
CXXC1-212ENST00000589940 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
CXXC1-212ENST00000589940 TIMM8BQ9Y5J9 83 aaPredicted RBP12.7□□□□□ -0.38
CXXC1-212ENST00000589940 TRAPPC1Q9Y5R8 145 aa12.7□□□□□ -0.38
CXXC1-212ENST00000589940 HTN1P15515 57 aa12.7□□□□□ -0.38
CXXC1-212ENST00000589940 NTF3P20783 257 aa12.7□□□□□ -0.38
CXXC1-212ENST00000589940 C1orf196B1AJZ1 125 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms