RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 AZU1P20160 251 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 ZNF493Q6ZR52 646 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 VGLL1Q99990 258 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 IGHV4-4A0A075B6R2 117 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 RBAKDNA6NC62 111 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 DIRC3C9JPN6 131 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 TMEM250H0YL14 139 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
SDF2-208ENST00000589788 BTF3P20290 206 aaKnown RBP7.38□□□□□ -1.23
SDF2-208ENST00000589788 RNASE4P34096 147 aaKnown RBP7.38□□□□□ -1.23
SDF2-208ENST00000589788 ZNF138P52744 262 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 TMEM263Q8WUH6 116 aaKnown RBP7.38□□□□□ -1.23
SDF2-208ENST00000589788 HIST1H2BAQ96A08 127 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 C11orf52Q96A22 123 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 PYGO2Q9BRQ0 406 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 ZNF492Q9P255 531 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 EPDR1Q9UM22 224 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 RPH3ALQ9UNE2 315 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 DNAH7Q8WXX0 4024 aa7.38□□□□□ -1.23
SDF2-208ENST00000589788 KLLNB2CW77 178 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 C9JQL5 133 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 TCRAP04437 139 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 DEFB130BP0DP73 79 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 DEFB130AP0DP74 79 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 CRISP2P16562 243 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 BTN1A1Q13410 526 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 SLC7A5P1Q8MH63 180 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 Q8TAT8 98 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
SDF2-208ENST00000589788 FAM19A4Q96LR4 140 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 ATG101Q9BSB4 218 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 KRTAP9-9Q9BYP9 154 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 KRTAP9-4Q9BYQ2 154 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 TREM1Q9NP99 234 aa7.37□□□□□ -1.23
SDF2-208ENST00000589788 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
SDF2-208ENST00000589788 TRBV7-9A0A0J9YWB2 115 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 SERTM2A0A1B0GWG4 89 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 PLAC8L1A1L4L8 177 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 PEX7O00628 323 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 HOXA5P20719 270 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 GNG5P63218 68 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 LGALS9CQ6DKI2 356 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 CYB561D1Q8N8Q1 229 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 NDUFAF3Q9BU61 184 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 APLNQ9ULZ1 77 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
SDF2-208ENST00000589788 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 CBY3A6NI87 242 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 SNURFLB1AK76 121 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 K7EQM0 130 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 GOLT1AQ6ZVE7 132 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 ZFAND2AQ8N6M9 145 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
SDF2-208ENST00000589788 LENEPQ9Y5L5 61 aa7.35□□□□□ -1.23
SDF2-208ENST00000589788 FBLL1A6NHQ2 334 aaKnown RBP7.34□□□□□ -1.23
SDF2-208ENST00000589788 ZNF324O75467 553 aaPredicted RBP7.34□□□□□ -1.23
SDF2-208ENST00000589788 S100A9P06702 114 aaKnown RBP7.34□□□□□ -1.23
SDF2-208ENST00000589788 SFTA3P0C7M3 94 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 AKR1C3P42330 323 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 PRR9Q5T870 116 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 TMEM75Q8N9X5 138 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 FMC1Q96HJ9 113 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 LINC00467Q9BRT7 94 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 PARLQ9H300 379 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 KLF12Q9Y4X4 402 aa7.34□□□□□ -1.23
SDF2-208ENST00000589788 TMEM218A2RU14 115 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 F5H768 121 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 ATP5G1P05496 136 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 RPL35P42766 123 aaKnown RBP7.33□□□□□ -1.24
SDF2-208ENST00000589788 CEBPGP53567 150 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 TMEM183BQ1AE95 376 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 SOHLH1Q5JUK2 328 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
SDF2-208ENST00000589788 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
SDF2-208ENST00000589788 IGHV1OR15-1A0A075B7D0 117 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 TRBV6-1A0A0K0K1D8 114 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 GAGE12BA1L429 117 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 C9JCJ5 164 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 GAGE7O76087 117 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 IGLV2-11P01706 119 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 GAGE12FP0CL80 117 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 GAGE12GP0CL81 117 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 GAGE12IP0CL82 117 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 UBE2G1P62253 170 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 FLI1Q01543 452 aaPredicted RBP7.32□□□□□ -1.24
SDF2-208ENST00000589788 ANXA2RQ3ZCQ2 193 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 TMEM88Q6PEY1 159 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 Q86TA4 180 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 LINC00479Q96M42 142 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 SMIM7Q9BQ49 75 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 NDFIP1Q9BT67 221 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 SEC11CQ9BY50 192 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 GSN-AS1Q9NRJ2 163 aa7.32□□□□□ -1.24
SDF2-208ENST00000589788 TRBV20OR9-2A0A075B6H5 130 aa7.31□□□□□ -1.24
SDF2-208ENST00000589788 TRAV8-1A0A0A6YYK1 113 aa7.31□□□□□ -1.24
SDF2-208ENST00000589788 TRAV34A0A0B4J273 112 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms