RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 C19orf71A6NCJ1 209 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 M0R036 132 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 AZU1P20160 251 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 ADIRFQ15847 76 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 LINC01559Q495D7 138 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 Q8NAQ8 132 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 C16orf74Q96GX8 76 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 TP53TG3Q9ULZ0 132 aa10.95□□□□□ -0.66
ATG4D-211ENST00000589753 TRGV11A0A075B6L2 103 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 IGHV4-28A0A0C4DH34 117 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 B4DEV8 164 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 KRBOX1C9JBD0 128 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 P01737 135 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 TYMSP04818 313 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 ZNF493Q6ZR52 646 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 SLC7A5P1Q8MH63 180 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 RNASE8Q8TDE3 154 aaKnown RBP10.94□□□□□ -0.66
ATG4D-211ENST00000589753 TMEM263Q8WUH6 116 aaKnown RBP10.94□□□□□ -0.66
ATG4D-211ENST00000589753 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
ATG4D-211ENST00000589753 RNASE7Q9H1E1 156 aaKnown RBP10.94□□□□□ -0.66
ATG4D-211ENST00000589753 TMEM189A5PLL7 270 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 GNRH2O43555 120 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 ERVFC1-1P60608 527 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 IBA57Q5T440 356 aaKnown RBP10.93□□□□□ -0.66
ATG4D-211ENST00000589753 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 ISOC2Q96AB3 205 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
ATG4D-211ENST00000589753 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
ATG4D-211ENST00000589753 DEFB4AO15263 64 aa10.92□□□□□ -0.66
ATG4D-211ENST00000589753 RPL19P84098 196 aaKnown RBP10.92□□□□□ -0.66
ATG4D-211ENST00000589753 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
ATG4D-211ENST00000589753 OR2D3Q8NGH3 330 aa10.92□□□□□ -0.66
ATG4D-211ENST00000589753 IGHV3-16A0A0C4DH30 117 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 EMP1P54849 157 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 C11orf68Q9H3H3 251 aaKnown RBP10.91□□□□□ -0.66
ATG4D-211ENST00000589753 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
ATG4D-211ENST00000589753 GSN-AS1Q9NRJ2 163 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 OSTCQ9NRP0 149 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
ATG4D-211ENST00000589753 A0A0J9YWU9 116 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 PLAC8L1A1L4L8 177 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 SNURFLB1AK76 121 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 GATCO43716 136 aaKnown RBP10.9□□□□□ -0.66
ATG4D-211ENST00000589753 ASIPP42127 132 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 RPS20P60866 119 aaKnown RBP10.9□□□□□ -0.66
ATG4D-211ENST00000589753 C10orf91Q5T1B1 145 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 C15orf54Q8N8G6 183 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 U3KQK5 164 aa10.9□□□□□ -0.66
ATG4D-211ENST00000589753 XKRY2A2RUG3 117 aa10.89□□□□□ -0.67
ATG4D-211ENST00000589753 CXCL1P09341 107 aa10.89□□□□□ -0.67
ATG4D-211ENST00000589753 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
ATG4D-211ENST00000589753 TCL1AP56279 114 aa10.89□□□□□ -0.67
ATG4D-211ENST00000589753 DNLZQ5SXM8 178 aa10.89□□□□□ -0.67
ATG4D-211ENST00000589753 ZNF575Q86XF7 245 aa10.89□□□□□ -0.67
ATG4D-211ENST00000589753 CARHSP1Q9Y2V2 147 aaKnown RBP10.89□□□□□ -0.67
ATG4D-211ENST00000589753 TIMM8BQ9Y5J9 83 aaPredicted RBP10.89□□□□□ -0.67
ATG4D-211ENST00000589753 RNASE3P12724 160 aaKnown RBP10.88□□□□□ -0.67
ATG4D-211ENST00000589753 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
ATG4D-211ENST00000589753 IL17DQ8TAD2 202 aa10.88□□□□□ -0.67
ATG4D-211ENST00000589753 NOP10Q9NPE3 64 aaKnown RBP10.88□□□□□ -0.67
ATG4D-211ENST00000589753 NBEAL2Q6ZNJ1 2754 aa10.88□□□□□ -0.67
ATG4D-211ENST00000589753 H3BVH4 76 aa10.87□□□□□ -0.67
ATG4D-211ENST00000589753 DAZ2Q13117 558 aaKnown RBP10.87□□□□□ -0.67
ATG4D-211ENST00000589753 CT83Q5H943 113 aa10.87□□□□□ -0.67
ATG4D-211ENST00000589753 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
ATG4D-211ENST00000589753 SPXQ9BT56 116 aa10.87□□□□□ -0.67
ATG4D-211ENST00000589753 IL36BQ9NZH7 164 aa10.87□□□□□ -0.67
ATG4D-211ENST00000589753 LYRM9A8MSI8 78 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 A8MWL6 223 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 ARMS2P0C7Q2 107 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 SPART-AS1P0CW21 52 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 GZMBP10144 247 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 FAM222AQ5U5X8 452 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 DKK2Q9UBU2 259 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 V9GYV3 84 aa10.86□□□□□ -0.67
ATG4D-211ENST00000589753 TEX48A0A1B0GUV7 120 aa10.85□□□□□ -0.67
ATG4D-211ENST00000589753 PPP1R2P9O14990 202 aa10.85□□□□□ -0.67
ATG4D-211ENST00000589753 APOC3P02656 99 aa10.85□□□□□ -0.67
ATG4D-211ENST00000589753 MED14OSP0DP75 135 aa10.85□□□□□ -0.67
ATG4D-211ENST00000589753 RNF212Q495C1 297 aa10.85□□□□□ -0.67
ATG4D-211ENST00000589753 CELA1Q9UNI1 258 aa10.85□□□□□ -0.67
ATG4D-211ENST00000589753 CXorf65A6NEN9 183 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 M0R2P5 195 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 SPINK4O60575 86 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 MT-ND4LP03901 98 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 IGLC6P0CF74 106 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 LGALS9BQ3B8N2 356 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 FER1L6-AS1Q8NA97 138 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
ATG4D-211ENST00000589753 EDA2RQ9HAV5 297 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 MRPL16Q9NX20 251 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms