RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 TDRG1Q3Y452 100 aa10.11□□□□□ -0.79
ACTN4-211ENST00000589528 LELP1Q5T871 98 aa10.11□□□□□ -0.79
ACTN4-211ENST00000589528 FXYD5Q96DB9 178 aa10.11□□□□□ -0.79
ACTN4-211ENST00000589528 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
ACTN4-211ENST00000589528 KCNIP2Q9NS61 270 aa10.11□□□□□ -0.79
ACTN4-211ENST00000589528 UBE2L3P68036 154 aaKnown RBP10.1□□□□□ -0.79
ACTN4-211ENST00000589528 RAB32Q13637 225 aa10.1□□□□□ -0.79
ACTN4-211ENST00000589528 SLC25A29Q8N8R3 303 aa10.1□□□□□ -0.79
ACTN4-211ENST00000589528 SDF2L1Q9HCN8 221 aa10.1□□□□□ -0.79
ACTN4-211ENST00000589528 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
ACTN4-211ENST00000589528 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
ACTN4-211ENST00000589528 TRAV8-3A0A0A6YYJ7 113 aa10.09□□□□□ -0.79
ACTN4-211ENST00000589528 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
ACTN4-211ENST00000589528 DIRC3C9JPN6 131 aa10.09□□□□□ -0.79
ACTN4-211ENST00000589528 WFDC2Q14508 124 aa10.09□□□□□ -0.79
ACTN4-211ENST00000589528 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
ACTN4-211ENST00000589528 TRAV6A0A075B6T7 132 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 OXTP01178 125 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 TYMSP04818 313 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 TOR2AQ5JU69 321 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 SCXQ7RTU7 201 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 CMTM2Q8TAZ6 248 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 KCNS1Q96KK3 526 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 SEC22CQ9BRL7 303 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 SH3BGRL3Q9H299 93 aa10.08□□□□□ -0.8
ACTN4-211ENST00000589528 IGHV3-73A0A0B4J1V6 119 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 TRBV6-4A0A1B0GX49 114 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 RBFOX3A6NFN3 312 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 CIDEAO60543 219 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 LINC01620Q4KN68 170 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 FAM74A1Q5RGS3 127 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 OR5C1Q8NGR4 320 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 TMED6Q8WW62 240 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 NMES1Q9C002 83 aa10.07□□□□□ -0.8
ACTN4-211ENST00000589528 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
ACTN4-211ENST00000589528 F6UZH7 168 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 TCRBP04435 133 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 IL7P13232 177 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 NHLH2Q02577 135 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 KHDC3LQ587J8 217 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 NUDT15Q9NV35 164 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 COX11Q9Y6N1 276 aa10.06□□□□□ -0.8
ACTN4-211ENST00000589528 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 LYRM1O43325 122 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 TAS2R45P59539 299 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 ASAH1Q13510 395 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 CFAP126Q5VTH2 177 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 BAALCQ8WXS3 180 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 RMI2Q96E14 147 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 SDHCQ99643 169 aaPredicted RBP10.05□□□□□ -0.8
ACTN4-211ENST00000589528 TREM1Q9NP99 234 aa10.05□□□□□ -0.8
ACTN4-211ENST00000589528 PGPA6NDG6 321 aa10.04□□□□□ -0.8
ACTN4-211ENST00000589528 MGST1P10620 155 aaKnown RBP10.04□□□□□ -0.8
ACTN4-211ENST00000589528 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
ACTN4-211ENST00000589528 CHAC1Q9BUX1 264 aa10.04□□□□□ -0.8
ACTN4-211ENST00000589528 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
ACTN4-211ENST00000589528 RS1O15537 224 aa10.03□□□□□ -0.8
ACTN4-211ENST00000589528 ACOT6Q3I5F7 207 aaPredicted RBP10.03□□□□□ -0.8
ACTN4-211ENST00000589528 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
ACTN4-211ENST00000589528 Q8N3U1 123 aa10.03□□□□□ -0.8
ACTN4-211ENST00000589528 Q8N976 141 aa10.03□□□□□ -0.8
ACTN4-211ENST00000589528 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
ACTN4-211ENST00000589528 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
ACTN4-211ENST00000589528 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
ACTN4-211ENST00000589528 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
ACTN4-211ENST00000589528 IL15RAQ13261 267 aa10.02□□□□□ -0.81
ACTN4-211ENST00000589528 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.81
ACTN4-211ENST00000589528 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
ACTN4-211ENST00000589528 PLA2G10O15496 165 aa10.01□□□□□ -0.81
ACTN4-211ENST00000589528 H2AFB2P0C5Z0 115 aa10.01□□□□□ -0.81
ACTN4-211ENST00000589528 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
ACTN4-211ENST00000589528 IGKV2D-24A0A075B6R9 120 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 TRAV8-1A0A0A6YYK1 113 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 GAGE12JA6NER3 117 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 SEC11BP0C7V7 166 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 GAGE1Q13065 139 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 GAGE4Q13068 117 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 GAGE5Q13069 117 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 LRRC37A5PQ49AS3 106 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 GAGE13Q4V321 117 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 ZNF506Q5JVG8 444 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 CIRBP-AS1Q8TBR5 109 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 MBD2Q9UBB5 411 aa10□□□□□ -0.81
ACTN4-211ENST00000589528 A0A087WWC5 75 aa9.99□□□□□ -0.81
ACTN4-211ENST00000589528 IGLV2-8P01709 118 aa9.99□□□□□ -0.81
ACTN4-211ENST00000589528 KRTAP10-4P60372 401 aaPredicted RBP9.99□□□□□ -0.81
ACTN4-211ENST00000589528 TVP23CQ96ET8 276 aa9.99□□□□□ -0.81
ACTN4-211ENST00000589528 PGPEP1LA6NFU8 196 aa9.98□□□□□ -0.81
ACTN4-211ENST00000589528 TAAR5O14804 337 aa9.98□□□□□ -0.81
ACTN4-211ENST00000589528 SCGB1C1Q8TD33 95 aa9.98□□□□□ -0.81
ACTN4-211ENST00000589528 SGK494Q96LW2 274 aa9.98□□□□□ -0.81
ACTN4-211ENST00000589528 A0A1W2PPV4 95 aa9.97□□□□□ -0.81
ACTN4-211ENST00000589528 EIF3GO75821 320 aaKnown RBP eCLIP9.97□□□□□ -0.814e-7■□□□□ 10.8
ACTN4-211ENST00000589528 RPL37AP61513 92 aaKnown RBP9.97□□□□□ -0.81
ACTN4-211ENST00000589528 GNG5P63218 68 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms