RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
TPM4-208ENST00000588410 FBLL1A6NHQ2 334 aaKnown RBP13.53□□□□□ -0.24
TPM4-208ENST00000588410 IFNA7P01567 189 aa13.53□□□□□ -0.24
TPM4-208ENST00000588410 FLI1Q01543 452 aaPredicted RBP13.53□□□□□ -0.24
TPM4-208ENST00000588410 FHL2Q14192 279 aa13.53□□□□□ -0.24
TPM4-208ENST00000588410 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
TPM4-208ENST00000588410 PRNTQ86SH4 94 aa13.53□□□□□ -0.24
TPM4-208ENST00000588410 SMLR1H3BR10 107 aa13.52□□□□□ -0.25
TPM4-208ENST00000588410 M0R2P5 195 aa13.52□□□□□ -0.25
TPM4-208ENST00000588410 TYMSP04818 313 aa13.52□□□□□ -0.25
TPM4-208ENST00000588410 CRYBA4P53673 196 aa13.52□□□□□ -0.25
TPM4-208ENST00000588410 TMEM75Q8N9X5 138 aa13.52□□□□□ -0.25
TPM4-208ENST00000588410 GCGP01275 180 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 UBE2G2P60604 165 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 MRPL23Q16540 153 aaKnown RBP13.51□□□□□ -0.25
TPM4-208ENST00000588410 SMUG1Q53HV7 270 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 PCNPQ8WW12 178 aaKnown RBP13.51□□□□□ -0.25
TPM4-208ENST00000588410 ZNF479Q96JC4 524 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 KRTAP17-1Q9BYP8 105 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 CYTL1Q9NRR1 136 aa13.51□□□□□ -0.25
TPM4-208ENST00000588410 FAT2Q9NYQ8 4349 aa13.5□□□□□ -0.25
TPM4-208ENST00000588410 PPT1P50897 306 aa13.5□□□□□ -0.25
TPM4-208ENST00000588410 FGF8P55075 233 aaPredicted RBP13.5□□□□□ -0.25
TPM4-208ENST00000588410 OR4C5Q8NGB2 326 aa13.5□□□□□ -0.25
TPM4-208ENST00000588410 NKX6-2Q9C056 277 aaPredicted RBP13.5□□□□□ -0.25
TPM4-208ENST00000588410 DNAH17Q9UFH2 4485 aa13.5□□□□□ -0.25
TPM4-208ENST00000588410 TRAV4A0A0B4J268 109 aa13.49□□□□□ -0.25
TPM4-208ENST00000588410 MAP1LC3B2A6NCE7 125 aa13.49□□□□□ -0.25
TPM4-208ENST00000588410 IGLV2-11P01706 119 aa13.49□□□□□ -0.25
TPM4-208ENST00000588410 PFN1P07737 140 aaKnown RBP13.49□□□□□ -0.25
TPM4-208ENST00000588410 ZNF80P51504 273 aaPredicted RBP13.49□□□□□ -0.25
TPM4-208ENST00000588410 MAP1LC3BQ9GZQ8 125 aa13.49□□□□□ -0.25
TPM4-208ENST00000588410 A0A1W2PPQ1 181 aa13.48□□□□□ -0.25
TPM4-208ENST00000588410 NEGR1Q7Z3B1 354 aa13.48□□□□□ -0.25
TPM4-208ENST00000588410 KCNRGQ8N5I3 272 aa13.48□□□□□ -0.25
TPM4-208ENST00000588410 STOML3Q8TAV4 291 aa13.48□□□□□ -0.25
TPM4-208ENST00000588410 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
TPM4-208ENST00000588410 ORM1P02763 201 aa13.47□□□□□ -0.25
TPM4-208ENST00000588410 SRIP30626 198 aa13.47□□□□□ -0.25
TPM4-208ENST00000588410 ZNF345Q14585 488 aa13.47□□□□□ -0.25
TPM4-208ENST00000588410 LINC00479Q96M42 142 aa13.47□□□□□ -0.25
TPM4-208ENST00000588410 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
TPM4-208ENST00000588410 FAM74A7A6NL05 159 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 C9JCJ5 164 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 PEX7O00628 323 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 SIVA1O15304 175 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 TNP2Q05952 138 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 C11orf21Q9P2W6 132 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 ARL2-SNX15V9GYD0 113 aa13.46□□□□□ -0.25
TPM4-208ENST00000588410 NXPH4O95158 308 aa13.45□□□□□ -0.26
TPM4-208ENST00000588410 GYPEP15421 78 aa13.45□□□□□ -0.26
TPM4-208ENST00000588410 ZNF876PQ49A33 203 aa13.45□□□□□ -0.26
TPM4-208ENST00000588410 LYPD5Q6UWN5 251 aa13.45□□□□□ -0.26
TPM4-208ENST00000588410 A0A0D9SG52 128 aa13.44□□□□□ -0.26
TPM4-208ENST00000588410 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
TPM4-208ENST00000588410 HMSDA8MTL9 139 aa13.44□□□□□ -0.26
TPM4-208ENST00000588410 K7EQD1 137 aa13.44□□□□□ -0.26
TPM4-208ENST00000588410 ZNF471Q9BX82 626 aaPredicted RBP13.44□□□□□ -0.26
TPM4-208ENST00000588410 KRTAP1-5Q9BYS1 174 aa13.44□□□□□ -0.26
TPM4-208ENST00000588410 CST9LP1Q5W188 147 aa13.43□□□□□ -0.26
TPM4-208ENST00000588410 TXNDC17Q9BRA2 123 aa13.43□□□□□ -0.26
TPM4-208ENST00000588410 HERC2O95714 4834 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 FABP5P3A8MUU1 101 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 UMAD1C9J7I0 102 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 BCL2L11O43521 198 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 SEC11BP0C7V7 166 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 BTF3P20290 206 aaKnown RBP13.42□□□□□ -0.26
TPM4-208ENST00000588410 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
TPM4-208ENST00000588410 UBE2G1P62253 170 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 EIF5AP63241 154 aaKnown RBP13.42□□□□□ -0.26
TPM4-208ENST00000588410 Q86TA4 180 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 OR11H4Q8NGC9 324 aa13.42□□□□□ -0.26
TPM4-208ENST00000588410 CIDEAO60543 219 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 MED14OSP0DP75 135 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 FHITP49789 147 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 FAM213BQ8TBF2 198 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 TCEAL7Q9BRU2 100 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 ZFP30Q9Y2G7 519 aa13.41□□□□□ -0.26
TPM4-208ENST00000588410 PFDN1O60925 122 aa13.4□□□□□ -0.26
TPM4-208ENST00000588410 ASIPP42127 132 aa13.4□□□□□ -0.26
TPM4-208ENST00000588410 SH2D6Q7Z4S9 175 aa13.4□□□□□ -0.26
TPM4-208ENST00000588410 NHLRC2Q8NBF2 726 aa13.4□□□□□ -0.26
TPM4-208ENST00000588410 FMC1Q96HJ9 113 aa13.4□□□□□ -0.26
TPM4-208ENST00000588410 TRAV9-2A0A087WT02 112 aa13.39□□□□□ -0.27
TPM4-208ENST00000588410 RS1O15537 224 aa13.39□□□□□ -0.27
TPM4-208ENST00000588410 GATA1P15976 413 aaPredicted RBP13.39□□□□□ -0.27
TPM4-208ENST00000588410 CFAP126Q5VTH2 177 aa13.39□□□□□ -0.27
TPM4-208ENST00000588410 ZNF575Q86XF7 245 aa13.39□□□□□ -0.27
TPM4-208ENST00000588410 PTH2Q96A98 100 aa13.39□□□□□ -0.27
TPM4-208ENST00000588410 MUC4Q99102 2169 aa13.39□□□□□ -0.27
TPM4-208ENST00000588410 IGHV3-73A0A0B4J1V6 119 aa13.38□□□□□ -0.27
TPM4-208ENST00000588410 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
TPM4-208ENST00000588410 PGPEP1LA6NFU8 196 aa13.38□□□□□ -0.27
TPM4-208ENST00000588410 PAGE4O60829 102 aa13.38□□□□□ -0.27
TPM4-208ENST00000588410 RNASE3P12724 160 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms