RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SPINT3P49223 89 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
LINC01538-201ENST00000588074 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 M0R135 149 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 CCL21O00585 134 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 TSHBP01222 138 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 IGHV3-33P01772 117 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 APOC4P55056 127 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 Q0VFX4 171 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 C10orf25Q5T742 122 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 DAND5Q8N907 189 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 SMCR5Q8TEV8 140 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 C6orf106Q9H6K1 298 aaPredicted RBP4.24□□□□□ -1.73
LINC01538-201ENST00000588074 RANBP2P49792 3224 aaKnown RBP4.24□□□□□ -1.73
LINC01538-201ENST00000588074 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 FGF12P61328 243 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 SLC50A1Q9BRV3 221 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 TRAV40A0A0B4J280 105 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 H7C423 109 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 MIR17HGQ75NE6 70 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 ZNRF1Q8ND25 227 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 TM2D3Q9BRN9 247 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
LINC01538-201ENST00000588074 TRBV6-6A0A0A6YYG2 114 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
LINC01538-201ENST00000588074 IQCF6A8MYZ5 107 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 BCE1O60756 84 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 TIMM17BO60830 172 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 FOXF2Q12947 444 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 NSUN5P1Q3KNT7 163 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 Q6JHZ5 121 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 SCGB1D4Q6XE38 83 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 VSIG2Q96IQ7 327 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 GOLGA2P5Q9HBQ8 144 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 PROK2Q9HC23 129 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 MRPL35Q9NZE8 188 aaKnown RBP4.22□□□□□ -1.73
LINC01538-201ENST00000588074 SNRNP200O75643 2136 aaKnown RBP4.22□□□□□ -1.73
LINC01538-201ENST00000588074 AGRNO00468 2067 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 HEATR5BQ9P2D3 2071 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 A0A1W2PQD3 144 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 D6R8Y8 96 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 RNASE2P10153 161 aaKnown RBP4.22□□□□□ -1.73
LINC01538-201ENST00000588074 LGALS3P17931 250 aaKnown RBP4.22□□□□□ -1.73
LINC01538-201ENST00000588074 ZNF329Q86UD4 541 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 MKXQ8IYA7 352 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 PRSS33Q8NF86 280 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 NUP37Q8NFH4 326 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 RNASE6Q93091 150 aaKnown RBP4.22□□□□□ -1.73
LINC01538-201ENST00000588074 ZNF714Q96N38 554 aa4.22□□□□□ -1.73
LINC01538-201ENST00000588074 ARID1BQ8NFD5 2236 aaPredicted RBP4.21□□□□□ -1.73
LINC01538-201ENST00000588074 TCF20Q9UGU0 1960 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 GOLGA4Q13439 2230 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 IGLV5-45A0A087WSX0 123 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 LOC389332A0A1B0GUA5 103 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 ZNF815PA8K554 130 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 PVRIGQ6DKI7 326 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 FOXL2NBQ6ZUU3 175 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 LY6G5BQ8NDX9 201 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 TMEM263Q8WUH6 116 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 MOB4Q9Y3A3 225 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 FREM3P0C091 2139 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 DYSFO75923 2080 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 RBMY1BA6NDE4 496 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 RBMY1EA6NEQ0 496 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 C4orf51C9J302 202 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 F8VRH5 84 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 H7BZZ5 65 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 NDUFB3O43676 98 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 NDUFC1O43677 76 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 IGHV4-39P01824 125 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 CCKP06307 115 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 COX6CP09669 75 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 RBMY1DP0C7P1 496 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 RBMY1A1P0DJD3 496 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 RBMY1CP0DJD4 496 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 RBMY1FQ15415 496 aaKnown RBP4.21□□□□□ -1.74
LINC01538-201ENST00000588074 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 LINC00596Q86U02 117 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 KLHDC9Q8NEP7 349 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 DCANP1Q8TF63 244 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
LINC01538-201ENST00000588074 MPDZO75970 2070 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 TANC2Q9HCD6 1990 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1-6A0A0C4DH72 117 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 COX6B1P14854 86 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 XCL1P47992 114 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 SS18Q15532 418 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 GUSBP11Q6P575 273 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 ITLN1Q8WWA0 313 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 XCL2Q9UBD3 114 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 IGLV5-39A0A0G2JS06 123 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 A0A0J9YY99 117 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 TRBV6-1A0A0K0K1D8 114 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 CXorf51AA0A1B0GTR3 108 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms