RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ORM1P02763 201 aa12.76□□□□□ -0.37
TRIM47-205ENST00000587774 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM47-205ENST00000587774 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
TRIM47-205ENST00000587774 ALG5Q9Y673 324 aa12.76□□□□□ -0.37
TRIM47-205ENST00000587774 C9JCJ5 164 aa12.75□□□□□ -0.37
TRIM47-205ENST00000587774 CDC34P49427 236 aaPredicted RBP12.75□□□□□ -0.37
TRIM47-205ENST00000587774 ERVFC1-1P60608 527 aa12.75□□□□□ -0.37
TRIM47-205ENST00000587774 OR4C5Q8NGB2 326 aa12.75□□□□□ -0.37
TRIM47-205ENST00000587774 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
TRIM47-205ENST00000587774 SCRT2Q9NQ03 307 aa12.75□□□□□ -0.37
TRIM47-205ENST00000587774 LOC100131303A0A0U1RQF7 123 aa12.74□□□□□ -0.37
TRIM47-205ENST00000587774 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
TRIM47-205ENST00000587774 HSD17B11Q8NBQ5 300 aa12.74□□□□□ -0.37
TRIM47-205ENST00000587774 TXNDC17Q9BRA2 123 aa12.74□□□□□ -0.37
TRIM47-205ENST00000587774 SDF2L1Q9HCN8 221 aa12.74□□□□□ -0.37
TRIM47-205ENST00000587774 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 STAG3L2P0CL84 134 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 STAG3L3P0CL85 134 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 NFE4Q86UQ8 179 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 OR2G3Q8NGZ4 309 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 ASB13Q8WXK3 278 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 FAT1Q14517 4588 aa12.73□□□□□ -0.37
TRIM47-205ENST00000587774 EREGO14944 169 aa12.72□□□□□ -0.37
TRIM47-205ENST00000587774 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
TRIM47-205ENST00000587774 PSMG3Q9BT73 122 aaPredicted RBP12.72□□□□□ -0.37
TRIM47-205ENST00000587774 TCRAP04437 139 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 EVI2AP22794 236 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 ATP6V0CP27449 155 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 ZNF80P51504 273 aaPredicted RBP12.71□□□□□ -0.37
TRIM47-205ENST00000587774 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 RAB24Q969Q5 203 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 C11orf21Q9P2W6 132 aa12.71□□□□□ -0.37
TRIM47-205ENST00000587774 A0A087WTM6 91 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 SERTM2A0A1B0GWG4 89 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 K7EP13 123 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 GATA1P15976 413 aaPredicted RBP12.7□□□□□ -0.38
TRIM47-205ENST00000587774 GCHFRP30047 84 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 CDPF1Q6NVV7 123 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 NHLRC2Q8NBF2 726 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 SUN5Q8TC36 379 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 SH3BGRL3Q9H299 93 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
TRIM47-205ENST00000587774 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
TRIM47-205ENST00000587774 GCGP01275 180 aa12.69□□□□□ -0.38
TRIM47-205ENST00000587774 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
TRIM47-205ENST00000587774 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
TRIM47-205ENST00000587774 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
TRIM47-205ENST00000587774 CRYGDP07320 174 aa12.68□□□□□ -0.38
TRIM47-205ENST00000587774 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
TRIM47-205ENST00000587774 PSG8Q9UQ74 426 aa12.68□□□□□ -0.38
TRIM47-205ENST00000587774 K7EQM0 130 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 PTTG1O95997 202 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 PPT1P50897 306 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 SERF2P84101 59 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 DPPA3Q6W0C5 159 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 SLC25A29Q8N8R3 303 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 MED28Q9H204 178 aa12.67□□□□□ -0.38
TRIM47-205ENST00000587774 CXorf1O96002 111 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 MBP02144 154 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 PFN1P07737 140 aaKnown RBP12.66□□□□□ -0.38
TRIM47-205ENST00000587774 SUMO1P63165 101 aaKnown RBP12.66□□□□□ -0.38
TRIM47-205ENST00000587774 FLI1Q01543 452 aaPredicted RBP12.66□□□□□ -0.38
TRIM47-205ENST00000587774 ZFP69Q49AA0 526 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 Q5BKY6 102 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 CFAP126Q5VTH2 177 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 C10orf126Q8N4M7 172 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 CYB561D1Q8N8Q1 229 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 TMEM167BQ9NRX6 74 aa12.66□□□□□ -0.38
TRIM47-205ENST00000587774 IGHV3-38A0A0C4DH36 116 aa12.65□□□□□ -0.38
TRIM47-205ENST00000587774 TAAR5O14804 337 aa12.65□□□□□ -0.38
TRIM47-205ENST00000587774 RS1O15537 224 aa12.65□□□□□ -0.38
TRIM47-205ENST00000587774 TIRAPP58753 221 aa12.65□□□□□ -0.38
TRIM47-205ENST00000587774 SMUG1Q53HV7 270 aa12.65□□□□□ -0.38
TRIM47-205ENST00000587774 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
TRIM47-205ENST00000587774 VPS13BQ7Z7G8 4022 aa12.65□□□□□ -0.39
TRIM47-205ENST00000587774 IGHV3-73A0A0B4J1V6 119 aa12.64□□□□□ -0.39
TRIM47-205ENST00000587774 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
TRIM47-205ENST00000587774 RHOHQ15669 191 aa12.64□□□□□ -0.39
TRIM47-205ENST00000587774 ZNF506Q5JVG8 444 aa12.64□□□□□ -0.39
TRIM47-205ENST00000587774 ACTR3CQ9C0K3 210 aaPredicted RBP12.64□□□□□ -0.39
TRIM47-205ENST00000587774 BATF3Q9NR55 127 aa12.64□□□□□ -0.39
TRIM47-205ENST00000587774 TNFSF18Q9UNG2 199 aa12.64□□□□□ -0.39
TRIM47-205ENST00000587774 TRBV6-4A0A1B0GX49 114 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 PGPEP1LA6NFU8 196 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 GIPP09681 153 aaPredicted RBP12.63□□□□□ -0.39
TRIM47-205ENST00000587774 XGP55808 180 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 KRTAP10-1P60331 282 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
TRIM47-205ENST00000587774 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
TRIM47-205ENST00000587774 CIDEAO60543 219 aa12.62□□□□□ -0.39
TRIM47-205ENST00000587774 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
TRIM47-205ENST00000587774 A0A1W2PRE2 83 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms