RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 LINC00467Q9BRT7 94 aa11.11□□□□□ -0.63
NCLN-203ENST00000587740 LRP1BQ9NZR2 4599 aa11.11□□□□□ -0.63
NCLN-203ENST00000587740 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 CBY3A6NI87 242 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 SMUG1Q53HV7 270 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 Q6ZQT7 251 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
NCLN-203ENST00000587740 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
NCLN-203ENST00000587740 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
NCLN-203ENST00000587740 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
NCLN-203ENST00000587740 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 Q86TA4 180 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 ZNF680Q8NEM1 530 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
NCLN-203ENST00000587740 TIMM8BQ9Y5J9 83 aaPredicted RBP11.09□□□□□ -0.63
NCLN-203ENST00000587740 PLAC8L1A1L4L8 177 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 GCGP01275 180 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 BCL2P10415 239 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 MUC21Q5SSG8 566 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 TEX261Q6UWH6 196 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
NCLN-203ENST00000587740 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
NCLN-203ENST00000587740 DAD1P61803 113 aa11.07□□□□□ -0.64
NCLN-203ENST00000587740 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
NCLN-203ENST00000587740 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
NCLN-203ENST00000587740 NOP10Q9NPE3 64 aaKnown RBP11.07□□□□□ -0.64
NCLN-203ENST00000587740 NAGKQ9UJ70 344 aa11.07□□□□□ -0.64
NCLN-203ENST00000587740 PDE6DO43924 150 aa11.06□□□□□ -0.64
NCLN-203ENST00000587740 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
NCLN-203ENST00000587740 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
NCLN-203ENST00000587740 TP53TG3Q9ULZ0 132 aa11.06□□□□□ -0.64
NCLN-203ENST00000587740 LTAP01374 205 aa11.05□□□□□ -0.64
NCLN-203ENST00000587740 IBA57Q5T440 356 aaKnown RBP11.05□□□□□ -0.64
NCLN-203ENST00000587740 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
NCLN-203ENST00000587740 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
NCLN-203ENST00000587740 KCNS1Q96KK3 526 aa11.05□□□□□ -0.64
NCLN-203ENST00000587740 GSN-AS1Q9NRJ2 163 aa11.05□□□□□ -0.64
NCLN-203ENST00000587740 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 RBFOX3A6NFN3 312 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 FABP5P3A8MUU1 101 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 DEFB130BP0DP73 79 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 DEFB130AP0DP74 79 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 TCL1AP56279 114 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 DAZ2Q13117 558 aaKnown RBP11.04□□□□□ -0.64
NCLN-203ENST00000587740 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 TMEM183AQ8IXX5 376 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 HERC1Q15751 4861 aa11.04□□□□□ -0.64
NCLN-203ENST00000587740 RPL35P42766 123 aaKnown RBP11.03□□□□□ -0.64
NCLN-203ENST00000587740 COX8CQ7Z4L0 72 aa11.03□□□□□ -0.64
NCLN-203ENST00000587740 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
NCLN-203ENST00000587740 SDF2L1Q9HCN8 221 aa11.03□□□□□ -0.64
NCLN-203ENST00000587740 MED9Q9NWA0 146 aa11.03□□□□□ -0.64
NCLN-203ENST00000587740 APOBP04114 4563 aaKnown RBP11.02□□□□□ -0.64
NCLN-203ENST00000587740 GNRH2O43555 120 aa11.02□□□□□ -0.65
NCLN-203ENST00000587740 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
NCLN-203ENST00000587740 ZNF506Q5JVG8 444 aa11.02□□□□□ -0.65
NCLN-203ENST00000587740 UBE2DNLQ8IWF7 75 aa11.02□□□□□ -0.65
NCLN-203ENST00000587740 MAPKAPK5-AS1Q8N8E1 139 aa11.02□□□□□ -0.65
NCLN-203ENST00000587740 DERL1Q9BUN8 251 aa11.02□□□□□ -0.65
NCLN-203ENST00000587740 TYMSP04818 313 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 TNP2Q05952 138 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 FAM162BQ5T6X4 162 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 C1orf134Q5TEV5 83 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
NCLN-203ENST00000587740 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
NCLN-203ENST00000587740 TRGV1A0A0A0MS02 117 aa11□□□□□ -0.65
NCLN-203ENST00000587740 GAGE12BA1L429 117 aa11□□□□□ -0.65
NCLN-203ENST00000587740 C16orf90A8MZG2 172 aa11□□□□□ -0.65
NCLN-203ENST00000587740 GAGE7O76087 117 aa11□□□□□ -0.65
NCLN-203ENST00000587740 ORM1P02763 201 aa11□□□□□ -0.65
NCLN-203ENST00000587740 GAGE12FP0CL80 117 aa11□□□□□ -0.65
NCLN-203ENST00000587740 GAGE12GP0CL81 117 aa11□□□□□ -0.65
NCLN-203ENST00000587740 GAGE12IP0CL82 117 aa11□□□□□ -0.65
NCLN-203ENST00000587740 HTN3P15516 51 aa11□□□□□ -0.65
NCLN-203ENST00000587740 CRIP1P50238 77 aa11□□□□□ -0.65
NCLN-203ENST00000587740 ZNF674Q2M3X9 581 aa11□□□□□ -0.65
NCLN-203ENST00000587740 TOR2AQ5JU69 321 aa11□□□□□ -0.65
NCLN-203ENST00000587740 SOHLH1Q5JUK2 328 aa11□□□□□ -0.65
NCLN-203ENST00000587740 PCNPQ8WW12 178 aaKnown RBP11□□□□□ -0.65
NCLN-203ENST00000587740 FAM210AQ96ND0 272 aa11□□□□□ -0.65
NCLN-203ENST00000587740 SPXQ9BT56 116 aa11□□□□□ -0.65
NCLN-203ENST00000587740 MLST8Q9BVC4 326 aa11□□□□□ -0.65
NCLN-203ENST00000587740 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
NCLN-203ENST00000587740 SPINK4O60575 86 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms