RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 H3BRN7 92 aa10.74□□□□□ -0.69
CACNA1A-209ENST00000587525 LINC00311Q8N616 119 aa10.74□□□□□ -0.69
CACNA1A-209ENST00000587525 SMG1Q96Q15 3661 aaKnown RBP10.74□□□□□ -0.69
CACNA1A-209ENST00000587525 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 A0A1W2PRX2 142 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 HAX1O00165 279 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 DPM2O94777 84 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 TRAV12-2A0A075B6T6 113 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 H3BRM9 83 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 KLF5Q13887 457 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 URB1-AS1Q96HZ7 61 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 TRAV41A0A0B4J266 112 aa10.73□□□□□ -0.69
CACNA1A-209ENST00000587525 OR5A1Q8NGJ0 315 aa10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 MRPL35Q9NZE8 188 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 CCL19Q99731 98 aa10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 CTSGP08311 255 aa10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 NPC2P61916 151 aa10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 CFHR4Q92496 578 aa10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
CACNA1A-209ENST00000587525 PSMB11A5LHX3 300 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 KNCNA6PVL3 124 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 IGF1P05019 195 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 PSMG4Q5JS54 123 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 OR9G4Q8NGQ1 327 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 KAAG1Q9UBP8 84 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 CRIP1P50238 77 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 BLCAPP62952 87 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 DPF1Q92782 380 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 NCOR1P1Q9H4R4 102 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
CACNA1A-209ENST00000587525 NPFFO15130 113 aa10.71□□□□□ -0.7
CACNA1A-209ENST00000587525 DTX2Q86UW9 622 aa10.71□□□□□ -0.7
CACNA1A-209ENST00000587525 FANCD2OSQ96PS1 177 aa10.71□□□□□ -0.7
CACNA1A-209ENST00000587525 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.7
CACNA1A-209ENST00000587525 NPIPB6E9PJ23 425 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 ASIPP42127 132 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 IGHV7-81A0A0B4J1V7 117 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 GAGE12HA6NDE8 117 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 ZNF815PA8K554 130 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 GNRH2O43555 120 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 TRBV12-3P01733 135 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 Q6AWC8 147 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 C8orf86Q6ZUL3 223 aa10.7□□□□□ -0.7
CACNA1A-209ENST00000587525 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 RAX2Q96IS3 184 aa10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 NPFFR1Q9GZQ6 430 aa10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 RAB9AP51151 201 aa10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 HOXB4P17483 251 aaPredicted RBP10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 DGAT2L7PQ6IED9 249 aa10.69□□□□□ -0.7
CACNA1A-209ENST00000587525 PTH2Q96A98 100 aa10.68□□□□□ -0.7
CACNA1A-209ENST00000587525 KLK9Q9UKQ9 250 aa10.68□□□□□ -0.7
CACNA1A-209ENST00000587525 SPINK8P0C7L1 97 aa10.68□□□□□ -0.7
CACNA1A-209ENST00000587525 ADORA2A-AS1P86434 159 aa10.68□□□□□ -0.7
CACNA1A-209ENST00000587525 IGKV2D-26A0A0A0MRZ7 120 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 NDUFS8O00217 210 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 HOXA3O43365 443 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 SYT8Q8NBV8 401 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 IGHV4-39P01824 125 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 RAI1Q7Z5J4 1906 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 LINC01549A6NIU2 74 aa10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-209ENST00000587525 TRAV8-2A0A0B4J237 113 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 CRYGCP07315 174 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 PIMREGQ9BSJ6 248 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 PPBPP02775 128 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 KLF12Q9Y4X4 402 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 UCNP55089 124 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 C2orf91Q6ZV80 131 aa10.66□□□□□ -0.7
CACNA1A-209ENST00000587525 CSMD1Q96PZ7 3565 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 HLA-DRB4P13762 266 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 NXT2Q9NPJ8 142 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 HLA-DRB4X5D2U9 266 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 TNRC6BQ9UPQ9 1833 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 IGLV11-55A0A075B6I3 123 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 ATP5LO75964 103 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 IGHV4-38-2P0DP08 117 aa10.65□□□□□ -0.7
CACNA1A-209ENST00000587525 LAGE3Q14657 143 aa10.65□□□□□ -0.71
CACNA1A-209ENST00000587525 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.71
CACNA1A-209ENST00000587525 CT83Q5H943 113 aa10.65□□□□□ -0.71
CACNA1A-209ENST00000587525 UNQ9165/PRO28630Q6UXU0 137 aa10.65□□□□□ -0.71
CACNA1A-209ENST00000587525 CLUHP3Q96NS8 147 aa10.65□□□□□ -0.71
CACNA1A-209ENST00000587525 JPT2Q9H910 190 aa10.65□□□□□ -0.71
CACNA1A-209ENST00000587525 G3V4G9 280 aa10.64□□□□□ -0.71
CACNA1A-209ENST00000587525 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
CACNA1A-209ENST00000587525 KIR2DL4Q99706 377 aa10.64□□□□□ -0.71
CACNA1A-209ENST00000587525 TMEM14CQ9P0S9 112 aa10.64□□□□□ -0.71
CACNA1A-209ENST00000587525 CHTOPQ9Y3Y2 248 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-209ENST00000587525 Q8N9W7 124 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms