RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
TRAF4-216ENST00000586813 PGPA6NDG6 321 aa13.03□□□□□ -0.32
TRAF4-216ENST00000586813 TYMSP04818 313 aa13.03□□□□□ -0.32
TRAF4-216ENST00000586813 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
TRAF4-216ENST00000586813 F6UZH7 168 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 TIRAPP58753 221 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 FAM74A1Q5RGS3 127 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 NHLRC2Q8NBF2 726 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 SCGB1C1Q8TD33 95 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 SMIM3Q9BZL3 60 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 MBD2Q9UBB5 411 aa13.02□□□□□ -0.33
TRAF4-216ENST00000586813 IGHV3-38A0A0C4DH36 116 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 INMT-MINDY4F8WBC2 141 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 UPK1BO75841 260 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 MPC2O95563 127 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 PET100P0DJ07 73 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-216ENST00000586813 PPT1P50897 306 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 TVP23CQ96ET8 276 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 SDF2L1Q9HCN8 221 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 TREM1Q9NP99 234 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 MYCBP2O75592 4640 aa13.01□□□□□ -0.33
TRAF4-216ENST00000586813 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
TRAF4-216ENST00000586813 PQLC2Q6ZP29 291 aa13□□□□□ -0.33
TRAF4-216ENST00000586813 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
TRAF4-216ENST00000586813 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
TRAF4-216ENST00000586813 PSCAO43653 123 aa12.99□□□□□ -0.33
TRAF4-216ENST00000586813 SMR3BP02814 79 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-216ENST00000586813 RPL12P30050 165 aaKnown RBP12.99□□□□□ -0.33
TRAF4-216ENST00000586813 HAMPP81172 84 aa12.99□□□□□ -0.33
TRAF4-216ENST00000586813 LINC01556Q5JQF7 62 aa12.99□□□□□ -0.33
TRAF4-216ENST00000586813 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
TRAF4-216ENST00000586813 IGLV5-52A0A0A0MRZ9 124 aa12.98□□□□□ -0.33
TRAF4-216ENST00000586813 FBLL1A6NHQ2 334 aaKnown RBP12.98□□□□□ -0.33
TRAF4-216ENST00000586813 GNG5P63218 68 aa12.98□□□□□ -0.33
TRAF4-216ENST00000586813 IFITM3Q01628 133 aa12.98□□□□□ -0.33
TRAF4-216ENST00000586813 ACOT6Q3I5F7 207 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-216ENST00000586813 ASB13Q8WXK3 278 aa12.98□□□□□ -0.33
TRAF4-216ENST00000586813 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 IBA57-AS1B1ANH7 110 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 RAB2AP61019 212 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 SLC25A29Q8N8R3 303 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 NTN5Q8WTR8 489 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-216ENST00000586813 MARVELD1Q9BSK0 173 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 TMEM70Q9BUB7 260 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 WFDC1Q9HC57 220 aa12.97□□□□□ -0.33
TRAF4-216ENST00000586813 SRRM2Q9UQ35 2752 aaKnown RBP12.96□□□□□ -0.33
TRAF4-216ENST00000586813 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
TRAF4-216ENST00000586813 SSNA1O43805 119 aa12.96□□□□□ -0.33
TRAF4-216ENST00000586813 ZNF876PQ49A33 203 aa12.96□□□□□ -0.33
TRAF4-216ENST00000586813 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
TRAF4-216ENST00000586813 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
TRAF4-216ENST00000586813 RHOHQ15669 191 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 OR10J3Q5JRS4 329 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 CFAP126Q5VTH2 177 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 Q8N814 137 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 PRADC1Q9BSG0 188 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 NDFIP1Q9BT67 221 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 Q9HAA7 133 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 BOLA1Q9Y3E2 137 aa12.95□□□□□ -0.34
TRAF4-216ENST00000586813 TRBV6-4A0A1B0GX49 114 aa12.94□□□□□ -0.34
TRAF4-216ENST00000586813 FAM229AH3BQW9 127 aa12.94□□□□□ -0.34
TRAF4-216ENST00000586813 RS1O15537 224 aa12.94□□□□□ -0.34
TRAF4-216ENST00000586813 SGK494Q96LW2 274 aa12.94□□□□□ -0.34
TRAF4-216ENST00000586813 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
TRAF4-216ENST00000586813 FLG2Q5D862 2391 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-216ENST00000586813 SERTM2A0A1B0GWG4 89 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 CIDEAO60543 219 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 ARL14EPLP0DKL9 152 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-216ENST00000586813 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 Q6ZSN1 163 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 OR10G9Q8NGN4 311 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 OR10G7Q8NGN6 311 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 DNAH8Q96JB1 4490 aa12.93□□□□□ -0.34
TRAF4-216ENST00000586813 IGHV3-73A0A0B4J1V6 119 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 IGHV3-30P01768 117 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 IGHV3-33P01772 117 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 IGHV3-30-3P0DP02 117 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 IGHV3-30-5P0DP03 117 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 LELP1Q5T871 98 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 C9orf85Q96MD7 179 aa12.92□□□□□ -0.34
TRAF4-216ENST00000586813 TCRAP04437 139 aa12.91□□□□□ -0.34
TRAF4-216ENST00000586813 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-216ENST00000586813 DEFA1P59665 94 aa12.91□□□□□ -0.34
TRAF4-216ENST00000586813 DEFA3P59666 94 aa12.91□□□□□ -0.34
TRAF4-216ENST00000586813 TMEM75Q8N9X5 138 aa12.91□□□□□ -0.34
TRAF4-216ENST00000586813 TAAR5O14804 337 aa12.9□□□□□ -0.34
TRAF4-216ENST00000586813 GCGP01275 180 aa12.9□□□□□ -0.34
TRAF4-216ENST00000586813 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
TRAF4-216ENST00000586813 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
TRAF4-216ENST00000586813 LAGE3Q14657 143 aa12.9□□□□□ -0.34
TRAF4-216ENST00000586813 ZNF506Q5JVG8 444 aa12.9□□□□□ -0.34
TRAF4-216ENST00000586813 PGPEP1LA6NFU8 196 aa12.89□□□□□ -0.35
TRAF4-216ENST00000586813 K7EQM0 130 aa12.89□□□□□ -0.35
TRAF4-216ENST00000586813 MGST1P10620 155 aaKnown RBP12.89□□□□□ -0.35
TRAF4-216ENST00000586813 ATP6V0E2Q8NHE4 81 aa12.89□□□□□ -0.35
TRAF4-216ENST00000586813 PTH2Q96A98 100 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms