RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PPT1P50897 306 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 FAM159AQ6UWV7 190 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 SH2D6Q7Z4S9 175 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 SLC25A29Q8N8R3 303 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 NUDT15Q9NV35 164 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 NAGKQ9UJ70 344 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 LENEPQ9Y5L5 61 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-225ENST00000586385 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
BRCA1-225ENST00000586385 OR5C1Q8NGR4 320 aa7.84□□□□□ -1.15
BRCA1-225ENST00000586385 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
BRCA1-225ENST00000586385 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
BRCA1-225ENST00000586385 H0YIZ8 118 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 LECT2O14960 151 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 OR7C2O60412 319 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 CSN1S1P47710 185 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 OR10J3Q5JRS4 329 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 LELP1Q5T871 98 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 TMED6Q8WW62 240 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
BRCA1-225ENST00000586385 OR5AC2Q9NZP5 309 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 C11orf21Q9P2W6 132 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 FAT3Q8TDW7 4589 aa7.83□□□□□ -1.16
BRCA1-225ENST00000586385 TRAV8-1A0A0A6YYK1 113 aa7.82□□□□□ -1.16
BRCA1-225ENST00000586385 TRAV8-6A0A0B4J262 113 aa7.82□□□□□ -1.16
BRCA1-225ENST00000586385 FBLL1A6NHQ2 334 aaKnown RBP7.82□□□□□ -1.16
BRCA1-225ENST00000586385 F6UZH7 168 aa7.82□□□□□ -1.16
BRCA1-225ENST00000586385 RS1O15537 224 aa7.82□□□□□ -1.16
BRCA1-225ENST00000586385 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
BRCA1-225ENST00000586385 UBE2L3P68036 154 aaKnown RBP7.82□□□□□ -1.16
BRCA1-225ENST00000586385 LAGE3Q14657 143 aa7.82□□□□□ -1.16
BRCA1-225ENST00000586385 CFAP126Q5VTH2 177 aa7.82□□□□□ -1.16
BRCA1-225ENST00000586385 IGHV3-73A0A0B4J1V6 119 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 TRBV6-4A0A1B0GX49 114 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 SIX6O95475 246 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 LINC00694P0DN24 101 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 DNAJC30Q96LL9 226 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 Q9UF83 564 aa7.81□□□□□ -1.16
BRCA1-225ENST00000586385 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-225ENST00000586385 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 H2AFB2P0C5Z0 115 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-225ENST00000586385 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 GOLT1AQ6ZVE7 132 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 GTSF1LQ9H1H1 148 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 OTORQ9NRC9 128 aa7.8□□□□□ -1.16
BRCA1-225ENST00000586385 PGPA6NDG6 321 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 PGPEP1LA6NFU8 196 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 GNG5P63218 68 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 RHOHQ15669 191 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 ZNF876PQ49A33 203 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 LINC00299Q6ZSB3 139 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
BRCA1-225ENST00000586385 ATP6V0E2Q8NHE4 81 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 PRADC1Q9BSG0 188 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 TM2D2Q9BX73 214 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 SDF2L1Q9HCN8 221 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 TREM1Q9NP99 234 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
BRCA1-225ENST00000586385 RPH3ALQ9UNE2 315 aa7.79□□□□□ -1.16
BRCA1-225ENST00000586385 KHDC3LQ587J8 217 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 ZNF506Q5JVG8 444 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 FFAR4Q5NUL3 377 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 TMEM75Q8N9X5 138 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 ASB13Q8WXK3 278 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 SGK494Q96LW2 274 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 KCNIP2Q9NS61 270 aa7.78□□□□□ -1.16
BRCA1-225ENST00000586385 A6NHS1 94 aa7.77□□□□□ -1.17
BRCA1-225ENST00000586385 LRRC37A5PQ49AS3 106 aa7.77□□□□□ -1.17
BRCA1-225ENST00000586385 CIRBP-AS1Q8TBR5 109 aa7.77□□□□□ -1.17
BRCA1-225ENST00000586385 CHAC1Q9BUX1 264 aa7.77□□□□□ -1.17
BRCA1-225ENST00000586385 MBD2Q9UBB5 411 aa7.77□□□□□ -1.17
BRCA1-225ENST00000586385 BOLA1Q9Y3E2 137 aa7.77□□□□□ -1.17
BRCA1-225ENST00000586385 RNF222A6NCQ9 220 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 C17orf112F2Z3M2 114 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 OXTP01178 125 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
BRCA1-225ENST00000586385 HNRNPA3P51991 378 aaKnown RBP7.76□□□□□ -1.17
BRCA1-225ENST00000586385 ARL6IP6Q8N6S5 226 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 PTH2Q96A98 100 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 KCNS1Q96KK3 526 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 ATP5SQ99766 215 aa7.76□□□□□ -1.17
BRCA1-225ENST00000586385 TRAV8-3A0A0A6YYJ7 113 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 GAGE12JA6NER3 117 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 CIDEAO60543 219 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 IGLV2-11P01706 119 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
BRCA1-225ENST00000586385 GAGE1Q13065 139 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 GAGE4Q13068 117 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 GAGE5Q13069 117 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 GAGE13Q4V321 117 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 UFSP1Q6NVU6 142 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 SYT8Q8NBV8 401 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 CMTM2Q8TAZ6 248 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 NMES1Q9C002 83 aa7.75□□□□□ -1.17
BRCA1-225ENST00000586385 WFDC1Q9HC57 220 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms