RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 RASL10AQ92737 203 aa12.37□□□□□ -0.43
ERBB2-221ENST00000584888 C8orf49Q96NF6 230 aa12.37□□□□□ -0.43
ERBB2-221ENST00000584888 C11orf21Q9P2W6 132 aa12.37□□□□□ -0.43
ERBB2-221ENST00000584888 LINC00588Q9Y4M8 146 aa12.37□□□□□ -0.43
ERBB2-221ENST00000584888 IGHV3-16A0A0C4DH30 117 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 A0A0J9YY99 117 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 BCL2L11O43521 198 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 FHITP49789 147 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 IQCF2Q8IXL9 164 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 NKX6-2Q9C056 277 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-221ENST00000584888 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
ERBB2-221ENST00000584888 UBE2G2P60604 165 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 FHL2Q14192 279 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 Q6ZNX1 250 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 ZNF575Q86XF7 245 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 LINC00479Q96M42 142 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 NDFIP1Q9BT67 221 aa12.35□□□□□ -0.43
ERBB2-221ENST00000584888 TYMSP04818 313 aa12.34□□□□□ -0.43
ERBB2-221ENST00000584888 TMUB2Q71RG4 321 aa12.34□□□□□ -0.43
ERBB2-221ENST00000584888 PRNTQ86SH4 94 aa12.34□□□□□ -0.43
ERBB2-221ENST00000584888 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
ERBB2-221ENST00000584888 NAGKQ9UJ70 344 aa12.34□□□□□ -0.43
ERBB2-221ENST00000584888 PCLOQ9Y6V0 5065 aa12.34□□□□□ -0.43
ERBB2-221ENST00000584888 A0A096LPF7 62 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 TRAV34A0A0B4J273 112 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 KANTRA0A1W2PQU2 76 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 UMAD1C9J7I0 102 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 GCGP01275 180 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 TNP2Q05952 138 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 ESRGQ1W209 222 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 SAPCD1Q5SSQ6 148 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 C6orf223Q8N319 242 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 HIST1H2BAQ96A08 127 aa12.33□□□□□ -0.44
ERBB2-221ENST00000584888 ZNF471Q9BX82 626 aaPredicted RBP12.33□□□□□ -0.44
ERBB2-221ENST00000584888 PEX7O00628 323 aa12.32□□□□□ -0.44
ERBB2-221ENST00000584888 IFNA7P01567 189 aa12.32□□□□□ -0.44
ERBB2-221ENST00000584888 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
ERBB2-221ENST00000584888 PFN1P07737 140 aaKnown RBP12.32□□□□□ -0.44
ERBB2-221ENST00000584888 TCTE3Q8IZS6 198 aa12.32□□□□□ -0.44
ERBB2-221ENST00000584888 SDF2L1Q9HCN8 221 aa12.32□□□□□ -0.44
ERBB2-221ENST00000584888 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
ERBB2-221ENST00000584888 M0R2P5 195 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 CRYBA4P53673 196 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 SLAQ13239 276 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 COX8CQ7Z4L0 72 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 STOML3Q8TAV4 291 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 ZNF479Q96JC4 524 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 PKD1P98161 4303 aa12.31□□□□□ -0.44
ERBB2-221ENST00000584888 EIF5AP63241 154 aaKnown RBP12.3□□□□□ -0.44
ERBB2-221ENST00000584888 LGALSLQ3ZCW2 172 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-221ENST00000584888 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
ERBB2-221ENST00000584888 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
ERBB2-221ENST00000584888 UPK3BQ9BT76 320 aa12.3□□□□□ -0.44
ERBB2-221ENST00000584888 Q9H8V8 135 aa12.3□□□□□ -0.44
ERBB2-221ENST00000584888 HHLA3Q9XRX5 114 aa12.3□□□□□ -0.44
ERBB2-221ENST00000584888 DNAH11Q96DT5 4516 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 TRBV6-1A0A0K0K1D8 114 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 PAX4O43316 350 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 SFTA3P0C7M3 94 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 PPT1P50897 306 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 Q86TA4 180 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 SFT2D1Q8WV19 159 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
ERBB2-221ENST00000584888 TPT1P13693 172 aaKnown RBP12.28□□□□□ -0.44
ERBB2-221ENST00000584888 ZFP69Q49AA0 526 aa12.28□□□□□ -0.44
ERBB2-221ENST00000584888 PTH2Q96A98 100 aa12.28□□□□□ -0.44
ERBB2-221ENST00000584888 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
ERBB2-221ENST00000584888 DYNC1H1Q14204 4646 aaKnown RBP12.28□□□□□ -0.44
ERBB2-221ENST00000584888 IGKV3D-20A0A0C4DH25 116 aa12.27□□□□□ -0.45
ERBB2-221ENST00000584888 FABP5P3A8MUU1 101 aa12.27□□□□□ -0.45
ERBB2-221ENST00000584888 PAGE4O60829 102 aa12.27□□□□□ -0.45
ERBB2-221ENST00000584888 PFDN1O60925 122 aa12.27□□□□□ -0.45
ERBB2-221ENST00000584888 RNASE3P12724 160 aaKnown RBP12.27□□□□□ -0.45
ERBB2-221ENST00000584888 CRIP1P50238 77 aa12.27□□□□□ -0.45
ERBB2-221ENST00000584888 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
ERBB2-221ENST00000584888 TRGV4A0A0C4DH28 118 aa12.26□□□□□ -0.45
ERBB2-221ENST00000584888 C16orf90A8MZG2 172 aa12.26□□□□□ -0.45
ERBB2-221ENST00000584888 C1QBP02746 253 aa12.26□□□□□ -0.45
ERBB2-221ENST00000584888 CST9LP1Q5W188 147 aa12.26□□□□□ -0.45
ERBB2-221ENST00000584888 FMC1Q96HJ9 113 aa12.26□□□□□ -0.45
ERBB2-221ENST00000584888 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
ERBB2-221ENST00000584888 H2AFB1P0C5Y9 115 aa12.25□□□□□ -0.45
ERBB2-221ENST00000584888 OR4C5Q8NGB2 326 aa12.25□□□□□ -0.45
ERBB2-221ENST00000584888 ZC2HC1AQ96GY0 325 aa12.25□□□□□ -0.45
ERBB2-221ENST00000584888 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
ERBB2-221ENST00000584888 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
ERBB2-221ENST00000584888 RS1O15537 224 aa12.24□□□□□ -0.45
ERBB2-221ENST00000584888 LTAP01374 205 aa12.24□□□□□ -0.45
ERBB2-221ENST00000584888 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
ERBB2-221ENST00000584888 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
ERBB2-221ENST00000584888 DNLZQ5SXM8 178 aa12.24□□□□□ -0.45
ERBB2-221ENST00000584888 PGPEP1LA6NFU8 196 aa12.23□□□□□ -0.45
ERBB2-221ENST00000584888 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms