RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
UBBP4-202ENST00000584755 C12orf54Q6X4T0 127 aa10.31□□□□□ -0.76
UBBP4-202ENST00000584755 M0R2Z0 102 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
UBBP4-202ENST00000584755 SPINK4O60575 86 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 SPINK13Q1W4C9 94 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 DNLZQ5SXM8 178 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 TMEM136Q6ZRR5 245 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 TRPT1Q86TN4 253 aaKnown RBP10.3□□□□□ -0.76
UBBP4-202ENST00000584755 CNFNQ9BYD5 112 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 MT-ND6P03923 174 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 RAB5BP61020 215 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 TDRG1Q3Y452 100 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 ANXA2RQ3ZCQ2 193 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 FER1L6-AS1Q8NA97 138 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
UBBP4-202ENST00000584755 SSBP4Q9BWG4 385 aaPredicted RBP10.3□□□□□ -0.76
UBBP4-202ENST00000584755 STAB1Q9NY15 2570 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 TRAV12-3A0A0B4J271 114 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 A0A1B0GW15 77 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 GRIFINA4D1Z8 144 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 F2Z2F3 143 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 ARMS2P0C7Q2 107 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 HBBP68871 147 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 STHQ8IWL8 128 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
UBBP4-202ENST00000584755 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 SNURFLB1AK76 121 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 SNAI2O43623 268 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 HLA-DQA1P01909 254 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 OR5AL1P0C617 328 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 RIGQ13278 110 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 FRZBQ92765 325 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
UBBP4-202ENST00000584755 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
UBBP4-202ENST00000584755 AMBPP02760 352 aa10.27□□□□□ -0.77
UBBP4-202ENST00000584755 FABP9Q0Z7S8 132 aa10.27□□□□□ -0.77
UBBP4-202ENST00000584755 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
UBBP4-202ENST00000584755 NAGKQ9UJ70 344 aa10.27□□□□□ -0.77
UBBP4-202ENST00000584755 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
UBBP4-202ENST00000584755 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 IGLL1P15814 213 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
UBBP4-202ENST00000584755 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 TPPP3Q9BW30 176 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
UBBP4-202ENST00000584755 SCRT2Q9NQ03 307 aa10.26□□□□□ -0.77
UBBP4-202ENST00000584755 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 IGHV4-4A0A075B6R2 117 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 S100A8P05109 93 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 TRGC1P0CF51 173 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 ASIPP42127 132 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 CAMPP49913 170 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 FXYD7P58549 80 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
UBBP4-202ENST00000584755 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 ZFP82Q8N141 532 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 ANK2Q01484 3957 aa10.25□□□□□ -0.77
UBBP4-202ENST00000584755 IGHV1OR15-1A0A075B7D0 117 aa10.24□□□□□ -0.77
UBBP4-202ENST00000584755 GNRH2O43555 120 aa10.24□□□□□ -0.77
UBBP4-202ENST00000584755 RNASE3P12724 160 aaKnown RBP10.24□□□□□ -0.77
UBBP4-202ENST00000584755 GTSCR1Q86UQ5 136 aa10.24□□□□□ -0.77
UBBP4-202ENST00000584755 H3BVH4 76 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 RAB4BP61018 213 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 NUTF2P61970 127 aaKnown RBP10.23□□□□□ -0.77
UBBP4-202ENST00000584755 SLAQ13239 276 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 CMYA5Q8N3K9 4069 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 INSP01308 110 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 APCSP02743 223 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 GIG44P09565 113 aaPredicted RBP10.23□□□□□ -0.77
UBBP4-202ENST00000584755 NTF3P20783 257 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 CACNG7P62955 275 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
UBBP4-202ENST00000584755 OR10AG1Q8NH19 301 aa10.23□□□□□ -0.77
UBBP4-202ENST00000584755 NXPH4O95158 308 aa10.22□□□□□ -0.77
UBBP4-202ENST00000584755 S100A4P26447 101 aaKnown RBP10.22□□□□□ -0.77
UBBP4-202ENST00000584755 PRR31Q5SQ13 230 aa10.22□□□□□ -0.77
UBBP4-202ENST00000584755 Q8N1Y9 231 aa10.22□□□□□ -0.77
UBBP4-202ENST00000584755 DEFB125Q8N687 156 aa10.22□□□□□ -0.77
UBBP4-202ENST00000584755 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
UBBP4-202ENST00000584755 TRGV11A0A075B6L2 103 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms