RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 OR10G4Q8NGN3 311 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 OR10G9Q8NGN4 311 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 OR10G7Q8NGN6 311 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 SPXQ9BT56 116 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 RPH3ALQ9UNE2 315 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 HHLA3Q9XRX5 114 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 TRGV4A0A0C4DH28 118 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 SIVA1O15304 175 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC47-206ENST00000584112 CDC34P49427 236 aaPredicted RBP7.64□□□□□ -1.19
CCDC47-206ENST00000584112 CRYBA4P53673 196 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 MRPL23Q16540 153 aaKnown RBP7.64□□□□□ -1.19
CCDC47-206ENST00000584112 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 TDRG1Q3Y452 100 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 GOLT1AQ6ZVE7 132 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 TMEM183AQ8IXX5 376 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 OR2G3Q8NGZ4 309 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 KRTAP1-5Q9BYS1 174 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 MED28Q9H204 178 aa7.64□□□□□ -1.19
CCDC47-206ENST00000584112 TRAV21A0A0B4J279 112 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 SERTM2A0A1B0GWG4 89 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 EIF3GO75821 320 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC47-206ENST00000584112 MBP02144 154 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 ARL14EPLP0DKL9 152 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 FHL2Q14192 279 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 IQCF2Q8IXL9 164 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 HSD17B11Q8NBQ5 300 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 ASB13Q8WXK3 278 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 RASL10AQ92737 203 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 C8orf49Q96NF6 230 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 AQP10Q96PS8 301 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 PSMG3Q9BT73 122 aaPredicted RBP7.63□□□□□ -1.19
CCDC47-206ENST00000584112 TREM1Q9NP99 234 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 NAGKQ9UJ70 344 aa7.63□□□□□ -1.19
CCDC47-206ENST00000584112 K7EQM0 130 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 HMGB3O15347 200 aaKnown RBP7.62□□□□□ -1.19
CCDC47-206ENST00000584112 NXPH4O95158 308 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 GHRHP01286 108 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 ORM1P02763 201 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 STAG3L2P0CL84 134 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 STAG3L3P0CL85 134 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 HAMPP81172 84 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 SERF2P84101 59 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 PCNPQ8WW12 178 aaKnown RBP7.62□□□□□ -1.19
CCDC47-206ENST00000584112 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 SDF2L1Q9HCN8 221 aa7.62□□□□□ -1.19
CCDC47-206ENST00000584112 TRAV4A0A0B4J268 109 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 M0R2P5 195 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 SFTA3P0C7M3 94 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 SRIP30626 198 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 LYPD5Q6UWN5 251 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 C5orf17Q8NAS9 161 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 ZNF479Q96JC4 524 aa7.61□□□□□ -1.19
CCDC47-206ENST00000584112 TRAV8-1A0A0A6YYK1 113 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 C9JCJ5 164 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 F6UZH7 168 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 GIPP09681 153 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-206ENST00000584112 ATP6V0CP27449 155 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 GCHFRP30047 84 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 LINC00315P59091 139 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 GNG5P63218 68 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 INO80EQ8NBZ0 244 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-206ENST00000584112 OR4C5Q8NGB2 326 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 SUN5Q8TC36 379 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 RAB24Q969Q5 203 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 TXNDC17Q9BRA2 123 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 TNFSF18Q9UNG2 199 aa7.6□□□□□ -1.19
CCDC47-206ENST00000584112 TRAV9-2A0A087WT02 112 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 FBLL1A6NHQ2 334 aaKnown RBP7.59□□□□□ -1.19
CCDC47-206ENST00000584112 K7EP13 123 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 K7EQD1 137 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 LCE2BO14633 110 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 GNRH2O43555 120 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 CXorf1O96002 111 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 TCRAP04437 139 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 TYMSP04818 313 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 GYPEP15421 78 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 ZFP69Q49AA0 526 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 NFE4Q86UQ8 179 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
CCDC47-206ENST00000584112 ACTR3CQ9C0K3 210 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-206ENST00000584112 BORCS7-ASMTA0A0B4J1R7 106 aa7.58□□□□□ -1.2
CCDC47-206ENST00000584112 SH2D6Q7Z4S9 175 aa7.58□□□□□ -1.2
CCDC47-206ENST00000584112 LY96Q9Y6Y9 160 aa7.58□□□□□ -1.2
CCDC47-206ENST00000584112 TAAR5O14804 337 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 CIDEAO60543 219 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 GCGP01275 180 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
CCDC47-206ENST00000584112 EVI2AP22794 236 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
CCDC47-206ENST00000584112 FLI1Q01543 452 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-206ENST00000584112 SMUG1Q53HV7 270 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 Q6ZRN7 208 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-206ENST00000584112 CYB561D1Q8N8Q1 229 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 TMEM75Q8N9X5 138 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms