RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	GNG5	P63218	68 aa		10.19	□□□□□ -0.78
SREBF1-222	ENST00000583732	C10orf126	Q8N4M7	172 aa		10.19	□□□□□ -0.78
SREBF1-222	ENST00000583732	PPP1R1C	Q8WVI7	109 aa		10.19	□□□□□ -0.78
SREBF1-222	ENST00000583732		Q9HAA7	133 aa		10.19	□□□□□ -0.78
SREBF1-222	ENST00000583732	MBD2	Q9UBB5	411 aa		10.19	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGLV5-52	A0A0A0MRZ9	124 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	TRAV21	A0A0B4J279	112 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732		K7EP13	123 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	H2BFS	P57053	126 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	CYCS	P99999	105 aa	Known RBP	10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	TDRG1	Q3Y452	100 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	TMED6	Q8WW62	240 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	SGK494	Q96LW2	274 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	SDF2L1	Q9HCN8	221 aa		10.18	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGHV3-38	A0A0C4DH36	116 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	INMT-MINDY4	F8WBC2	141 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	HMGB3	O15347	200 aa	Known RBP	10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	GATA1	P15976	413 aa	Predicted RBP	10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	OR10J3	Q5JRS4	329 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	FAM74A1	Q5RGS3	127 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	S100Z	Q8WXG8	99 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	TVP23C	Q96ET8	276 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	TREM1	Q9NP99	234 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	DNAH8	Q96JB1	4490 aa		10.17	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGHV3-73	A0A0B4J1V6	119 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	FBLL1	A6NHQ2	334 aa	Known RBP	10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	MPC2	O95563	127 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGHV3-30	P01768	117 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGHV3-33	P01772	117 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGHV3-30-3	P0DP02	117 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	IGHV3-30-5	P0DP03	117 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	RPL12	P30050	165 aa	Known RBP	10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	RAB2A	P61019	212 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732	ASB13	Q8WXK3	278 aa		10.16	□□□□□ -0.78
SREBF1-222	ENST00000583732		A0A1W2PPV4	95 aa		10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	LRCOL1	A6NCL2	159 aa		10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	SSNA1	O43805	119 aa		10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	UPK1B	O75841	260 aa		10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	SH2D6	Q7Z4S9	175 aa		10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	WFDC1	Q9HC57	220 aa		10.15	□□□□□ -0.78
SREBF1-222	ENST00000583732	TRAV8-6	A0A0B4J262	113 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	FAM229A	H3BQW9	127 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	PET100	P0DJ07	73 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	IFITM3	Q01628	133 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	LINC01556	Q5JQF7	62 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	DPPA3	Q6W0C5	159 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	SLC25A29	Q8N8R3	303 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	KCNS1	Q96KK3	526 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	MYCBP2	O75592	4640 aa		10.14	□□□□□ -0.79
SREBF1-222	ENST00000583732	IBA57-AS1	B1ANH7	110 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	TIRAP	P58753	221 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	ZNF876P	Q49A33	203 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	PQLC2	Q6ZP29	291 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732		Q6ZSN1	163 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732		Q8N814	137 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	TMEM75	Q8N9X5	138 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	PRADC1	Q9BSG0	188 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	NDFIP1	Q9BT67	221 aa		10.13	□□□□□ -0.79
SREBF1-222	ENST00000583732	RS1	O15537	224 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	PFN1	P07737	140 aa	Known RBP	10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	ZNF80	P51504	273 aa	Predicted RBP	10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	RHOH	Q15669	191 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	CFAP126	Q5VTH2	177 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	LINC00299	Q6ZSB3	139 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	OR10G9	Q8NGN4	311 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	OR10G7	Q8NGN6	311 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	NTN5	Q8WTR8	489 aa	Predicted RBP	10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	C11orf21	Q9P2W6	132 aa		10.12	□□□□□ -0.79
SREBF1-222	ENST00000583732	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.11	□□□□□ -0.79
SREBF1-222	ENST00000583732	GCG	P01275	180 aa		10.11	□□□□□ -0.79
SREBF1-222	ENST00000583732	ARL14EPL	P0DKL9	152 aa		10.11	□□□□□ -0.79
SREBF1-222	ENST00000583732	TMEM70	Q9BUB7	260 aa		10.11	□□□□□ -0.79
SREBF1-222	ENST00000583732	PGPEP1L	A6NFU8	196 aa		10.1	□□□□□ -0.79
SREBF1-222	ENST00000583732	CDC34	P49427	236 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-222	ENST00000583732	ZNF506	Q5JVG8	444 aa		10.1	□□□□□ -0.79
SREBF1-222	ENST00000583732	LELP1	Q5T871	98 aa		10.1	□□□□□ -0.79
SREBF1-222	ENST00000583732		Q8N3U1	123 aa		10.1	□□□□□ -0.79
SREBF1-222	ENST00000583732	FAM30A	Q9NZY2	134 aa		10.1	□□□□□ -0.79
SREBF1-222	ENST00000583732	TRBV6-4	A0A1B0GX49	114 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	TCRA	P04437	139 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	WFDC2	Q14508	124 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	ARL6IP6	Q8N6S5	226 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	ATP6V0E2	Q8NHE4	81 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	C9orf85	Q96MD7	179 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	MARVELD1	Q9BSK0	173 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	PSG8	Q9UQ74	426 aa		10.09	□□□□□ -0.79
SREBF1-222	ENST00000583732	ZFP69	Q49AA0	526 aa		10.08	□□□□□ -0.8
SREBF1-222	ENST00000583732	PRNT	Q86SH4	94 aa		10.08	□□□□□ -0.8
SREBF1-222	ENST00000583732	C5orf17	Q8NAS9	161 aa		10.08	□□□□□ -0.8
SREBF1-222	ENST00000583732	HSD17B11	Q8NBQ5	300 aa		10.08	□□□□□ -0.8
SREBF1-222	ENST00000583732	GTSF1L	Q9H1H1	148 aa		10.08	□□□□□ -0.8
SREBF1-222	ENST00000583732	FLG2	Q5D862	2391 aa	Predicted RBP	10.08	□□□□□ -0.8
SREBF1-222	ENST00000583732	SERTM2	A0A1B0GWG4	89 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	GAGE12J	A6NER3	117 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732		K7EQM0	130 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	TAAR5	O14804	337 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	LECT2	O14960	151 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	STAG3L2	P0CL84	134 aa		10.07	□□□□□ -0.8
SREBF1-222	ENST00000583732	STAG3L3	P0CL85	134 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms