RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 C12orf74Q32Q52 190 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 SPRNQ5BIV9 151 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 CENPWQ5EE01 88 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 PRNTQ86SH4 94 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 OR4C13Q8NGP0 309 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 BMFQ96LC9 184 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 CARD19Q96LW7 228 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 AICDAQ9GZX7 198 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
SS18-223ENST00000583595 KLF13Q9Y2Y9 288 aaPredicted RBP3.32□□□□□ -1.88
SS18-223ENST00000583595 DYSFO75923 2080 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 DOCK8Q8NF50 2099 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 LOC107984640A0A0U1RRK4 108 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 C5orf49A4QMS7 147 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 A8MWV9 139 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 PGLYRP1O75594 196 aaPredicted RBP3.31□□□□□ -1.88
SS18-223ENST00000583595 ATP5G1P05496 136 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 SCTP09683 121 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 CTLA4P16410 223 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 GCHFRP30047 84 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 DSCR4P56555 118 aaPredicted RBP3.31□□□□□ -1.88
SS18-223ENST00000583595 HBBP68871 147 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 TFF3Q07654 80 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 C9orf153Q5TBE3 101 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 ZNF818PQ6ZRF7 136 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 C3orf22Q8N5N4 141 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 FXYD5Q96DB9 178 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 IMMP1LQ96LU5 166 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
SS18-223ENST00000583595 TMEM167BQ9NRX6 74 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 C21orf62Q9NYP8 219 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 IDI2-AS1Q9NZ38 188 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
SS18-223ENST00000583595 TDRD6O60522 2096 aaKnown RBP3.31□□□□□ -1.88
SS18-223ENST00000583595 TRAV4A0A0B4J268 109 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 IGKV1-9A0A0C4DH69 117 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 LOC389332A0A1B0GUA5 103 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 C4orf51C9J302 202 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 K7ERJ3 54 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 M0R2P5 195 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 UQCRQO14949 82 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 IGLC6P0CF74 106 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 HERVK_113P63121 156 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 DEFB103AP81534 67 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 FXYD3Q14802 87 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 KIAA2026Q5HYC2 2103 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 MORN3Q6PF18 240 aaPredicted RBP3.3□□□□□ -1.88
SS18-223ENST00000583595 AMTNQ6UX39 209 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 DGAT2L6Q6ZPD8 337 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 PCP2Q8IVA1 136 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 RPRMLQ8N4K4 120 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 C10orf126Q8N4M7 172 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 SLC37A2Q8TED4 501 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 CCL17Q92583 94 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 LINC00526Q96FQ7 95 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 CYYR1Q96J86 154 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 MRPL20Q9BYC9 149 aaKnown RBP3.3□□□□□ -1.88
SS18-223ENST00000583595 TP53TG1Q9Y2A0 90 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 FANCMQ8IYD8 2048 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 EML5Q05BV3 1969 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 NCKAP5O14513 1909 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 UNC80Q8N2C7 3258 aa3.3□□□□□ -1.88
SS18-223ENST00000583595 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 SPTBN5Q9NRC6 3674 aaKnown RBP3.29□□□□□ -1.88
SS18-223ENST00000583595 IGLV1-50A0A075B6I6 118 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 TRAV8-2A0A0B4J237 113 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 IGHV3-64DA0A0J9YX35 117 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 IGHV5-10-1A0A0J9YXX1 117 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 A0A0U1RQV1 116 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 NCR2O95944 276 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 IGLV3-1P01715 115 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 IL4P05112 153 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 CISD3P0C7P0 127 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 CECR9P0C854 216 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 CNTFRP26992 372 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 PPP1CAP62136 330 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 NDPQ00604 133 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 TEX36Q5VZQ5 186 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 C22orf39Q6P5X5 142 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 IGF2BP2-AS1Q96M15 143 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 IMUPQ9GZP8 106 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 PRNDQ9UKY0 176 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 COL4A2P08572 1712 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 DOCK9Q9BZ29 2069 aa3.29□□□□□ -1.88
SS18-223ENST00000583595 TRAV2A0A0B4J234 112 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 TRBV7-7A0A0K0K1E9 115 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 PGPA6NDG6 321 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 IGKV1-39P01597 117 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 IGKV1-5P01602 117 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 IGLV1-47P01700 117 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 IGKV1D-39P04432 117 aa3.28□□□□□ -1.88
SS18-223ENST00000583595 EDDM3BP56851 147 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms