RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 RHPN1-AS1Q9BWJ2 59 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 CR1P17927 2039 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 FBLL1A6NHQ2 334 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 K7EMI3 77 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 RAB9AP51151 201 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 S100A7AQ86SG5 101 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 JPT2Q9H910 190 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 U3KQK5 164 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 CRXO43186 299 aaPredicted RBP8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 PRM2P04554 102 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NAA38Q9BRA0 125 aaKnown RBP8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TRAV12-2A0A075B6T6 113 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NUDT3O95989 172 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 LEPP41159 167 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 ZFAND2AQ8N6M9 145 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SLC50A1Q9BRV3 221 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NPFFR1Q9GZQ6 430 aa8.08□□□□□ -1.12
CDK5RAP3-225ENST00000582482 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SOCS3O14543 225 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 LINC01545Q5VT33 79 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 Q6AWC8 147 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 COX8CQ7Z4L0 72 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SCRT2Q9NQ03 307 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 HELZ2Q9BYK8 2649 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 ANXA2RQ3ZCQ2 193 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SPANXN1Q5VSR9 72 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 KLHDC1Q8N7A1 406 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TMEM191AQ9H0A3 160 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
CDK5RAP3-225ENST00000582482 B4DSR2 109 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 ZNF688P0C7X2 276 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C21orf62-AS1Q17RA5 79 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 PCP2Q8IVA1 136 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 GOLT1BQ9Y3E0 138 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 CBY3A6NI87 242 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 DLEU1O43261 78 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TCF21O43680 179 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TMEM158Q8WZ71 300 aa8.06□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SETXQ7Z333 2677 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 A0A096LNT2 108 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 KLK9Q2XQG4 91 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C9orf47Q6ZRZ4 202 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 KLK9Q9UKQ9 250 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 IGKV2D-26A0A0A0MRZ7 120 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 K7EP13 123 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NDUFA4O00483 81 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 HBDP02042 147 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 MGPP08493 103 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SYNJ2BPP57105 145 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 PET117Q6UWS5 81 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 IFI27L1Q96BM0 104 aa8.05□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C20orf202A1L168 122 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NMUP48645 174 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 CFHR3Q02985 330 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 SLC25A34Q6PIV7 304 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C11orf44Q8N8P7 122 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 A0A1B0GW15 77 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 M0QZK8 103 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NRACQ8N912 160 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 OR2K2Q8NGT1 345 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 MAP1LC3AQ9H492 121 aa8.04□□□□□ -1.12
CDK5RAP3-225ENST00000582482 HECTD1Q9ULT8 2610 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 A0A087WWL8 130 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 TRAV12-3A0A0B4J271 114 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C7orf71A4D174 169 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 RBAKDNA6NC62 111 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 HSBP1L1C9JCN9 74 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 HOXA3O43365 443 aaPredicted RBP8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 RPS20P60866 119 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 PSMG4Q5JS54 123 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 OR10J6PQ8NGY7 276 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 LINC00477Q96M19 166 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 J3QL48 77 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NDUFS8O00217 210 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 CCL25O15444 150 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 CRIP2P52943 208 aaPredicted RBP8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 C9orf139Q6ZV77 190 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 FOXC2Q99958 501 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 ST20Q9HBF5 79 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 PEF1Q9UBV8 284 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
CDK5RAP3-225ENST00000582482 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
CDK5RAP3-225ENST00000582482 A0A087WW49 117 aa8.02□□□□□ -1.13
CDK5RAP3-225ENST00000582482 CD5LO43866 347 aa8.02□□□□□ -1.13
CDK5RAP3-225ENST00000582482 HTN1P15515 57 aa8.02□□□□□ -1.13
CDK5RAP3-225ENST00000582482 PSMB8P28062 276 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms