RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 SRSF1Q07955 248 aaKnown RBP eCLIP10.46□□□□□ -0.742e-7■■□□□ 11.6
RNF43-205ENST00000581868 KLRB1Q12918 225 aa10.46□□□□□ -0.74
RNF43-205ENST00000581868 C20orf173Q96LM9 149 aa10.46□□□□□ -0.74
RNF43-205ENST00000581868 RAXQ9Y2V3 346 aa10.46□□□□□ -0.74
RNF43-205ENST00000581868 BPESC1Q9GZL8 116 aa10.45□□□□□ -0.74
RNF43-205ENST00000581868 G3V4G9 280 aa10.45□□□□□ -0.74
RNF43-205ENST00000581868 NPFFO15130 113 aa10.45□□□□□ -0.74
RNF43-205ENST00000581868 CEND1Q8N111 149 aa10.45□□□□□ -0.74
RNF43-205ENST00000581868 A0A087WX48 190 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 C5orf56Q8N8D9 126 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
RNF43-205ENST00000581868 HIF1ANQ9NWT6 349 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 CELSR1Q9NYQ6 3014 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.44□□□□□ -0.74
RNF43-205ENST00000581868 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 NEGR1Q7Z3B1 354 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 U3KQE9 123 aa10.44□□□□□ -0.74
RNF43-205ENST00000581868 S100A4P26447 101 aaKnown RBP10.43□□□□□ -0.74
RNF43-205ENST00000581868 RPL24P83731 157 aaKnown RBP10.43□□□□□ -0.74
RNF43-205ENST00000581868 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 TRAV41A0A0B4J266 112 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 CIDEAO60543 219 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 ARL3P36405 182 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 LMO4P61968 165 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 UNQ9165/PRO28630Q6UXU0 137 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 SMIM2Q9BVW6 85 aa10.43□□□□□ -0.74
RNF43-205ENST00000581868 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
RNF43-205ENST00000581868 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
RNF43-205ENST00000581868 RPL11P62913 178 aaKnown RBP10.42□□□□□ -0.74
RNF43-205ENST00000581868 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
RNF43-205ENST00000581868 PHLDA1Q8WV24 401 aaPredicted RBP10.42□□□□□ -0.74
RNF43-205ENST00000581868 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
RNF43-205ENST00000581868 CLEC2AQ6UVW9 174 aa10.42□□□□□ -0.74
RNF43-205ENST00000581868 GLMPQ8WWB7 406 aa10.42□□□□□ -0.74
RNF43-205ENST00000581868 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
RNF43-205ENST00000581868 SCGB3A1Q96QR1 104 aa10.42□□□□□ -0.74
RNF43-205ENST00000581868 MRAP2Q96G30 205 aa10.41□□□□□ -0.74
RNF43-205ENST00000581868 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
RNF43-205ENST00000581868 MGPP08493 103 aa10.41□□□□□ -0.74
RNF43-205ENST00000581868 PLNP26678 52 aa10.41□□□□□ -0.74
RNF43-205ENST00000581868 C9orf139Q6ZV77 190 aa10.41□□□□□ -0.74
RNF43-205ENST00000581868 F6UB75 175 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 OR10J6PQ8NGY7 276 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 ITLN2Q8WWU7 325 aaPredicted RBP10.4□□□□□ -0.74
RNF43-205ENST00000581868 RASL10AQ92737 203 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 H7C1H1 209 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 IGHV3-11P01762 117 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 RNASE4P34096 147 aaKnown RBP10.4□□□□□ -0.74
RNF43-205ENST00000581868 SUMO2P61956 95 aaKnown RBP10.4□□□□□ -0.74
RNF43-205ENST00000581868 ZFAND2AQ8N6M9 145 aa10.4□□□□□ -0.74
RNF43-205ENST00000581868 F8VRH5 84 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 ANXA2RQ3ZCQ2 193 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 TRAV21A0A0B4J279 112 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 IGLL5B9A064 214 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 GNRH2O43555 120 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 AGRNO00468 2067 aa10.39□□□□□ -0.75
RNF43-205ENST00000581868 TEX48A0A1B0GUV7 120 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 ASIPP42127 132 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 C12orf74Q32Q52 190 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 FAM223BA6NKX1 122 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 LY6EQ16553 131 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 FAM223AQ8IWN6 122 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 ZNF479Q96JC4 524 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 HIVEP3Q5T1R4 2406 aa10.38□□□□□ -0.75
RNF43-205ENST00000581868 OR11H12B2RN74 326 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 OR11H1Q8NG94 326 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 OR11H2Q8NH07 326 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 TOMM6Q96B49 74 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 TRAV12-1A0A0B4J245 112 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 E9PLD3 99 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 LCNL1Q6ZST4 164 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
RNF43-205ENST00000581868 OVOL1O14753 267 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
RNF43-205ENST00000581868 MYMXA0A1B0GTQ4 84 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 H3BMG7 143 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 SRD5A1P18405 259 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 WFDC2Q14508 124 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 VPS13CQ709C8 3753 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 UCNP55089 124 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 TAL2Q16559 108 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 FOXI2Q6ZQN5 318 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 MTURNQ8N3F0 131 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 WFDC12Q8WWY7 111 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms