RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TRGV4A0A0C4DH28 118 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 IGHV3-16A0A0C4DH30 117 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 A0A0D9SG52 128 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 KANTRA0A1W2PQU2 76 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 TYMSP04818 313 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 SFTA3P0C7M3 94 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 ZNF80P51504 273 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-219ENST00000580540 ZNF345Q14585 488 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 SMUG1Q53HV7 270 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 SOHLH1Q5JUK2 328 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 TMEM75Q8N9X5 138 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 LINC00479Q96M42 142 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 HHLA3Q9XRX5 114 aa11.54□□□□□ -0.56
SREBF1-219ENST00000580540 A0A096LPF7 62 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 FHITP49789 147 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 PPT1P50897 306 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 FHL2Q14192 279 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 STOML3Q8TAV4 291 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 Q9H8V8 135 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 PRO0255Q9UI72 69 aa11.53□□□□□ -0.56
SREBF1-219ENST00000580540 FBLL1A6NHQ2 334 aaKnown RBP11.52□□□□□ -0.57
SREBF1-219ENST00000580540 FAM74A7A6NL05 159 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 M0R2P5 195 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 PEX7O00628 323 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 BCL2L11O43521 198 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 SLAQ13239 276 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 RASL10AQ92737 203 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 ZNF479Q96JC4 524 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 NKX6-2Q9C056 277 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-219ENST00000580540 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
SREBF1-219ENST00000580540 FAT2Q9NYQ8 4349 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 A0A1B0GV50 99 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 PFDN1O60925 122 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
SREBF1-219ENST00000580540 CRYBA4P53673 196 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 CST9LP1Q5W188 147 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 OR4C5Q8NGB2 326 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 FAM213BQ8TBF2 198 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 C11orf21Q9P2W6 132 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
SREBF1-219ENST00000580540 C9JCJ5 164 aa11.5□□□□□ -0.57
SREBF1-219ENST00000580540 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
SREBF1-219ENST00000580540 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
SREBF1-219ENST00000580540 SFT2D1Q8WV19 159 aa11.5□□□□□ -0.57
SREBF1-219ENST00000580540 MRPS16Q9Y3D3 137 aaKnown RBP11.5□□□□□ -0.57
SREBF1-219ENST00000580540 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
SREBF1-219ENST00000580540 HECTD4Q9Y4D8 3996 aa11.49□□□□□ -0.57
SREBF1-219ENST00000580540 TRAV4A0A0B4J268 109 aa11.48□□□□□ -0.57
SREBF1-219ENST00000580540 UMAD1C9J7I0 102 aa11.48□□□□□ -0.57
SREBF1-219ENST00000580540 EIF5AP63241 154 aaKnown RBP11.48□□□□□ -0.57
SREBF1-219ENST00000580540 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
SREBF1-219ENST00000580540 Q86TA4 180 aa11.48□□□□□ -0.57
SREBF1-219ENST00000580540 PCNPQ8WW12 178 aaKnown RBP11.48□□□□□ -0.57
SREBF1-219ENST00000580540 PAGE4O60829 102 aa11.47□□□□□ -0.57
SREBF1-219ENST00000580540 UBE2G1P62253 170 aa11.47□□□□□ -0.57
SREBF1-219ENST00000580540 ZNF876PQ49A33 203 aa11.47□□□□□ -0.57
SREBF1-219ENST00000580540 C6orf223Q8N319 242 aa11.47□□□□□ -0.57
SREBF1-219ENST00000580540 UPK3BQ9BT76 320 aa11.47□□□□□ -0.57
SREBF1-219ENST00000580540 A0A1B0GVY2 172 aa11.46□□□□□ -0.57
SREBF1-219ENST00000580540 FABP5P3A8MUU1 101 aa11.46□□□□□ -0.57
SREBF1-219ENST00000580540 TPT1P13693 172 aaKnown RBP11.46□□□□□ -0.57
SREBF1-219ENST00000580540 GYPEP15421 78 aa11.46□□□□□ -0.57
SREBF1-219ENST00000580540 SRIP30626 198 aa11.46□□□□□ -0.57
SREBF1-219ENST00000580540 K7EQD1 137 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 ORM1P02763 201 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 H2AFB1P0C5Y9 115 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 S100A4P26447 101 aaKnown RBP11.45□□□□□ -0.58
SREBF1-219ENST00000580540 AKR1C3P42330 323 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 MBD3L1Q8WWY6 194 aa11.45□□□□□ -0.58
SREBF1-219ENST00000580540 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 NXPH4O95158 308 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 LYPD5Q6UWN5 251 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 DPPA3Q6W0C5 159 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 ZC2HC1AQ96GY0 325 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 FMC1Q96HJ9 113 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 C9orf85Q96MD7 179 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 ZFP30Q9Y2G7 519 aa11.44□□□□□ -0.58
SREBF1-219ENST00000580540 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
SREBF1-219ENST00000580540 B4DEV8 164 aa11.43□□□□□ -0.58
SREBF1-219ENST00000580540 M0R036 132 aa11.43□□□□□ -0.58
SREBF1-219ENST00000580540 SIVA1O15304 175 aa11.43□□□□□ -0.58
SREBF1-219ENST00000580540 RNASE3P12724 160 aaKnown RBP11.43□□□□□ -0.58
SREBF1-219ENST00000580540 KRTAP1-5Q9BYS1 174 aa11.43□□□□□ -0.58
SREBF1-219ENST00000580540 LOC100131303A0A0U1RQF7 123 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 RS1O15537 224 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 SH2D1AO60880 128 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 ASIPP42127 132 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 CRIP1P50238 77 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 TNP2Q05952 138 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 LGALSLQ3ZCW2 172 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-219ENST00000580540 ZNF506Q5JVG8 444 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms