RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 EEF1AKMT3Q96AZ1 226 aa8.04□□□□□ -1.12
TOP3A-209ENST00000580095 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
TOP3A-209ENST00000580095 METTL26Q96S19 204 aa8.04□□□□□ -1.12
TOP3A-209ENST00000580095 KLK15Q9H2R5 256 aa8.04□□□□□ -1.12
TOP3A-209ENST00000580095 ZNF462Q96JM2 2506 aa8.04□□□□□ -1.12
TOP3A-209ENST00000580095 TRAV41A0A0B4J266 112 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 SMAD7O15105 426 aaKnown RBP8.03□□□□□ -1.12
TOP3A-209ENST00000580095 SRD5A1P18405 259 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 BLCAPP62952 87 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 DKK2Q9UBU2 259 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 UFC1Q9Y3C8 167 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 SORL1Q92673 2214 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 HSD52Q0P140 79 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 C20orf173Q96LM9 149 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 U3KQK5 164 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 FBN2P35556 2912 aa8.03□□□□□ -1.12
TOP3A-209ENST00000580095 F6UB75 175 aa8.02□□□□□ -1.12
TOP3A-209ENST00000580095 SMIM17P0DL12 118 aa8.02□□□□□ -1.12
TOP3A-209ENST00000580095 KIR3DS1Q14943 382 aa8.02□□□□□ -1.12
TOP3A-209ENST00000580095 PRR9Q5T870 116 aa8.02□□□□□ -1.12
TOP3A-209ENST00000580095 DEFB104AQ8WTQ1 72 aa8.02□□□□□ -1.12
TOP3A-209ENST00000580095 C16orf92Q96LL3 132 aa8.02□□□□□ -1.12
TOP3A-209ENST00000580095 PEF1Q9UBV8 284 aaKnown RBP8.02□□□□□ -1.12
TOP3A-209ENST00000580095 OR11H12B2RN74 326 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 EDN2P20800 178 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 PAX8Q06710 450 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 TMEM78Q5T7P6 136 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 OR11H1Q8NG94 326 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 OR11H2Q8NH07 326 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 MYO9AB2RTY4 2548 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 JMJD8Q96S16 334 aa8.02□□□□□ -1.13
TOP3A-209ENST00000580095 TSSC4Q9Y5U2 329 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-209ENST00000580095 GAGE12HA6NDE8 117 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 H3BUX3 64 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 HBDP02042 147 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 ARL3P36405 182 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 LEPP41159 167 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 NAA38Q9BRA0 125 aaKnown RBP8.01□□□□□ -1.13
TOP3A-209ENST00000580095 NPFFR1Q9GZQ6 430 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 IGHV4-30-2A0A087WSY4 118 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 IGHV1-69DA0A0B4J2H0 117 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 H3BVH4 76 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 CD5LO43866 347 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 IGHV1-69P01742 117 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 NMUP48645 174 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 C2orf91Q6ZV80 131 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 MOB4Q9Y3A3 225 aa8.01□□□□□ -1.13
TOP3A-209ENST00000580095 TEX48A0A1B0GUV7 120 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 PCP2Q8IVA1 136 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 DPF1Q92782 380 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 CITED1Q99966 193 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 TRBV7-1A0A0A6YYK4 115 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 FBLL1A6NHQ2 334 aaKnown RBP8□□□□□ -1.13
TOP3A-209ENST00000580095 ATP5J2P56134 94 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 TM4SF20Q53R12 229 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 MAPK1IP1LQ8NDC0 245 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 CCL19Q99731 98 aa8□□□□□ -1.13
TOP3A-209ENST00000580095 SETD2Q9BYW2 2564 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-209ENST00000580095 SLC50A1Q9BRV3 221 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 COX8AP10176 69 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-209ENST00000580095 SPXQ9BT56 116 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 MAP1LC3AQ9H492 121 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
TOP3A-209ENST00000580095 K7EP34 96 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 M0R381 172 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 AVPP01185 164 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 SPANXN1Q5VSR9 72 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 GPHB5Q86YW7 130 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 SPATA25Q9BR10 227 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
TOP3A-209ENST00000580095 IGHV7-4-1A0A0J9YVY3 117 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 PRSS1P07477 247 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 GTF2H5Q6ZYL4 71 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 TMEM158Q8WZ71 300 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 FGF6P10767 208 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 RPL32P62910 135 aaKnown RBP7.98□□□□□ -1.13
TOP3A-209ENST00000580095 C10orf99Q6UWK7 81 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 MS4A6AQ9H2W1 248 aa7.98□□□□□ -1.13
TOP3A-209ENST00000580095 SONP18583 2426 aaKnown RBP7.97□□□□□ -1.13
TOP3A-209ENST00000580095 C7orf71A4D174 169 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 HIST1H1AQ02539 215 aaPredicted RBP7.97□□□□□ -1.13
TOP3A-209ENST00000580095 RNF183Q96D59 192 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 EPG5Q9HCE0 2579 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 IGKV2D-26A0A0A0MRZ7 120 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 K7EMI3 77 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 PIMREGQ9BSJ6 248 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 YAE1D1Q9NRH1 226 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 U3KQE9 123 aa7.97□□□□□ -1.13
TOP3A-209ENST00000580095 RNASE4P34096 147 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms