RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 OR7C2O60412 319 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 IGHV3-30P01768 117 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 IGHV3-33P01772 117 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 IGHV3-30-3P0DP02 117 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 IGHV3-30-5P0DP03 117 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 NHLH2Q02577 135 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 LAGE3Q14657 143 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 LELP1Q5T871 98 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 SERTAD4-AS1Q5TG53 156 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 ATP5SQ99766 215 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 PRADC1Q9BSG0 188 aa5.68□□□□□ -1.5
CASC3-206ENST00000579238 TRAV21A0A0B4J279 112 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 TRBV6-4A0A1B0GX49 114 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 FBLL1A6NHQ2 334 aaKnown RBP5.67□□□□□ -1.5
CASC3-206ENST00000579238 CIDEAO60543 219 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 TYMSP04818 313 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 UBE2L3P68036 154 aaKnown RBP5.67□□□□□ -1.5
CASC3-206ENST00000579238 WFDC2Q14508 124 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 RHOHQ15669 191 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 SLC25A29Q8N8R3 303 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 SYT8Q8NBV8 401 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 OR5C1Q8NGR4 320 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 WDR61Q9GZS3 305 aaKnown RBP5.67□□□□□ -1.5
CASC3-206ENST00000579238 SDF2L1Q9HCN8 221 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 NUDT15Q9NV35 164 aa5.67□□□□□ -1.5
CASC3-206ENST00000579238 C17orf112F2Z3M2 114 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 H2AFB2P0C5Z0 115 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 TAS2R45P59539 299 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 KHDC3LQ587J8 217 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 HYLS1Q96M11 299 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 GTSF1LQ9H1H1 148 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 OTORQ9NRC9 128 aa5.66□□□□□ -1.5
CASC3-206ENST00000579238 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 PGPA6NDG6 321 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 F6UZH7 168 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 RS1O15537 224 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 ZNF876PQ49A33 203 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 FAM74A1Q5RGS3 127 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 CFAP126Q5VTH2 177 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 ARL6IP6Q8N6S5 226 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 ATP6V0E2Q8NHE4 81 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 CMTM2Q8TAZ6 248 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 ASB13Q8WXK3 278 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 TVP23CQ96ET8 276 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 TREM1Q9NP99 234 aa5.65□□□□□ -1.5
CASC3-206ENST00000579238 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
CASC3-206ENST00000579238 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.64□□□□□ -1.51
CASC3-206ENST00000579238 LECT2O14960 151 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 OXTP01178 125 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 MGST1P10620 155 aaKnown RBP5.64□□□□□ -1.51
CASC3-206ENST00000579238 ASAH1Q13510 395 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 TOR2AQ5JU69 321 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 FFAR4Q5NUL3 377 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 DPPA3Q6W0C5 159 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 NMES1Q9C002 83 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 SH3BGRL3Q9H299 93 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 OR5AC2Q9NZP5 309 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 RPH3ALQ9UNE2 315 aa5.64□□□□□ -1.51
CASC3-206ENST00000579238 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
CASC3-206ENST00000579238 TRAV8-1A0A0A6YYK1 113 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
CASC3-206ENST00000579238 Q8N3U1 123 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 PTH2Q96A98 100 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 C9orf85Q96MD7 179 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 MBD2Q9UBB5 411 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
CASC3-206ENST00000579238 FAM240BA0A1B0GVZ2 78 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 GGTLC3B5MD39 225 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 H0YIZ8 118 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 SIX6O95475 246 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 LRRC37A5PQ49AS3 106 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 LINC01620Q4KN68 170 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 ZNF506Q5JVG8 444 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 PQLC2Q6ZP29 291 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 DAZ4Q86SG3 579 aaKnown RBP5.62□□□□□ -1.51
CASC3-206ENST00000579238 Q8N976 141 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 NDFIP1Q9BT67 221 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 CHAC1Q9BUX1 264 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 CCDC32Q9BV29 185 aa5.62□□□□□ -1.51
CASC3-206ENST00000579238 DAZ3Q9NR90 486 aaKnown RBP5.62□□□□□ -1.51
CASC3-206ENST00000579238 A0A087WWC5 75 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 SERTM2A0A1B0GWG4 89 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 RBFOX3A6NFN3 312 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 PGPEP1LA6NFU8 196 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 TAAR5O14804 337 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 EIF3GO75821 320 aaKnown RBP eCLIP5.61□□□□□ -1.51
CASC3-206ENST00000579238 LINC00694P0DN24 101 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 GNG5P63218 68 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 CYCSP99999 105 aaKnown RBP5.61□□□□□ -1.51
CASC3-206ENST00000579238 ACOT6Q3I5F7 207 aaPredicted RBP5.61□□□□□ -1.51
CASC3-206ENST00000579238 HMCN2Q8NDA2 5059 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 SCGB1C1Q8TD33 95 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 RMI2Q96E14 147 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms