RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ERVFC1-1P60608 527 aa13.14□□□□□ -0.31
CDKN2A-213ENST00000579122 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
CDKN2A-213ENST00000579122 EIF4E3Q8N5X7 224 aaKnown RBP13.14□□□□□ -0.31
CDKN2A-213ENST00000579122 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
CDKN2A-213ENST00000579122 KLLNB2CW77 178 aa13.13□□□□□ -0.31
CDKN2A-213ENST00000579122 SPINK4O60575 86 aa13.13□□□□□ -0.31
CDKN2A-213ENST00000579122 LYPD1Q8N2G4 141 aa13.13□□□□□ -0.31
CDKN2A-213ENST00000579122 SUN5Q8TC36 379 aa13.13□□□□□ -0.31
CDKN2A-213ENST00000579122 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
CDKN2A-213ENST00000579122 ICOSQ9Y6W8 199 aa13.13□□□□□ -0.31
CDKN2A-213ENST00000579122 NXPH4O95158 308 aa13.12□□□□□ -0.31
CDKN2A-213ENST00000579122 NBEAP1P0C6P0 100 aa13.12□□□□□ -0.31
CDKN2A-213ENST00000579122 BLNKQ8WV28 456 aa13.12□□□□□ -0.31
CDKN2A-213ENST00000579122 LINC00477Q96M19 166 aa13.12□□□□□ -0.31
CDKN2A-213ENST00000579122 DMBT1Q9UGM3 2413 aaPredicted RBP13.12□□□□□ -0.31
CDKN2A-213ENST00000579122 MYCBP2O75592 4640 aa13.12□□□□□ -0.31
CDKN2A-213ENST00000579122 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 M0R3E3 92 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 PAX4O43316 350 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 INAFM2P0DMQ5 153 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 PPT1P50897 306 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 XGP55808 180 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 TCL1AP56279 114 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 ERCC8Q13216 396 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 BTN1A1Q13410 526 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 GNG13Q9P2W3 67 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 KLF12Q9Y4X4 402 aa13.11□□□□□ -0.31
CDKN2A-213ENST00000579122 SLAQ13239 276 aa13.1□□□□□ -0.31
CDKN2A-213ENST00000579122 IBA57Q5T440 356 aaKnown RBP13.1□□□□□ -0.31
CDKN2A-213ENST00000579122 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
CDKN2A-213ENST00000579122 PRO0255Q9UI72 69 aa13.1□□□□□ -0.31
CDKN2A-213ENST00000579122 CRISP2P16562 243 aa13.09□□□□□ -0.31
CDKN2A-213ENST00000579122 RNASE4P34096 147 aaKnown RBP13.09□□□□□ -0.31
CDKN2A-213ENST00000579122 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDKN2A-213ENST00000579122 UBE2G2P60604 165 aa13.09□□□□□ -0.31
CDKN2A-213ENST00000579122 PDE6HQ13956 83 aa13.09□□□□□ -0.31
CDKN2A-213ENST00000579122 LCE2DQ5TA82 110 aaPredicted RBP13.09□□□□□ -0.31
CDKN2A-213ENST00000579122 PAGE4O60829 102 aa13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 NDUFB4O95168 129 aa13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 IFNA1P01562 189 aa13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 GPX1P07203 203 aa13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 MANBALQ9NQG1 85 aa13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.32
CDKN2A-213ENST00000579122 TRAV9-2A0A087WT02 112 aa13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 CRYBA4P53673 196 aa13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 CST9LP1Q5W188 147 aa13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 C9orf47Q6ZRZ4 202 aa13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 VGLL1Q99990 258 aa13.07□□□□□ -0.32
CDKN2A-213ENST00000579122 A0A087WTM6 91 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 RBFOX3A6NFN3 312 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 FAM74A7A6NL05 159 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 BCL2P10415 239 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 Q5VSD8 79 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 FRZBQ92765 325 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 FAM210AQ96ND0 272 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 MED9Q9NWA0 146 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 MRPL16Q9NX20 251 aaKnown RBP13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 TP53TG3Q9ULZ0 132 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 HHLA3Q9XRX5 114 aa13.06□□□□□ -0.32
CDKN2A-213ENST00000579122 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 DNAH10OSP0CZ25 163 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 FHL2Q14192 279 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 TMEM78Q5T7P6 136 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 EXOC3-AS1Q8N2X6 119 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 EIF5A2Q9GZV4 153 aaKnown RBP13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 OTORQ9NRC9 128 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 LY96Q9Y6Y9 160 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 ARL2-SNX15V9GYD0 113 aa13.05□□□□□ -0.32
CDKN2A-213ENST00000579122 PGPA6NDG6 321 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 K7EP13 123 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 KRTAP10-1P60331 282 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 TOR2AQ5JU69 321 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 ZNF506Q5JVG8 444 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 PRR9Q5T870 116 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 NEGR1Q7Z3B1 354 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 C8orf49Q96NF6 230 aa13.04□□□□□ -0.32
CDKN2A-213ENST00000579122 SRRM2Q9UQ35 2752 aaKnown RBP13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 GGTLC3B5MD39 225 aa13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 ICAM4Q14773 271 aa13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 COMMD7Q86VX2 200 aa13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 NKX6-2Q9C056 277 aaPredicted RBP13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 DNAH8Q96JB1 4490 aa13.03□□□□□ -0.32
CDKN2A-213ENST00000579122 IGKV2-40A0A087WW87 121 aaPredicted RBP13.02□□□□□ -0.33
CDKN2A-213ENST00000579122 RAB19A4D1S5 217 aa13.02□□□□□ -0.33
CDKN2A-213ENST00000579122 IGKV2D-40P01614 121 aaPredicted RBP13.02□□□□□ -0.33
CDKN2A-213ENST00000579122 PEA15Q15121 130 aa13.02□□□□□ -0.33
CDKN2A-213ENST00000579122 MSRB1Q9NZV6 116 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms