RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TRGV4A0A0C4DH28 118 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 B4DSR2 109 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 C11orf68Q9H3H3 251 aaKnown RBP9.46□□□□□ -0.89
ERBB2-206ENST00000578373 VCYO14598 125 aa9.46□□□□□ -0.9
ERBB2-206ENST00000578373 DAZAP2Q15038 168 aaPredicted RBP9.46□□□□□ -0.9
ERBB2-206ENST00000578373 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
ERBB2-206ENST00000578373 C1orf159Q96HA4 380 aa9.46□□□□□ -0.9
ERBB2-206ENST00000578373 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
ERBB2-206ENST00000578373 TMEM14CQ9P0S9 112 aa9.46□□□□□ -0.9
ERBB2-206ENST00000578373 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.9
ERBB2-206ENST00000578373 H3BMG7 143 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 UBE2E1P51965 193 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
ERBB2-206ENST00000578373 VCANP13611 3396 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 K7EP13 123 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 DEFB131AP59861 70 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
ERBB2-206ENST00000578373 DAZ1Q9NQZ3 744 aaKnown RBP9.45□□□□□ -0.9
ERBB2-206ENST00000578373 TRGV11A0A075B6L2 103 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 GNRH2O43555 120 aa9.45□□□□□ -0.9
ERBB2-206ENST00000578373 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
ERBB2-206ENST00000578373 CFHR4Q92496 578 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 NUP210LQ5VU65 1888 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 BPTFQ12830 3046 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 C10orf126Q8N4M7 172 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 I3L2K1 104 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 ADARB2-AS1A8MUL3 147 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 SRSF8Q9BRL6 282 aaKnown RBP9.44□□□□□ -0.9
ERBB2-206ENST00000578373 MSRB2Q9Y3D2 182 aa9.44□□□□□ -0.9
ERBB2-206ENST00000578373 C9orf118A6NHY6 69 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 SDHAF1A6NFY7 115 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 Q8N8P6 123 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 PRADC1Q9BSG0 188 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 IGFL2Q6UWQ7 119 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
ERBB2-206ENST00000578373 WIPF2Q8TF74 440 aaPredicted RBP9.43□□□□□ -0.9
ERBB2-206ENST00000578373 C9JAW5 83 aa9.42□□□□□ -0.9
ERBB2-206ENST00000578373 SAP30O75446 220 aa9.42□□□□□ -0.9
ERBB2-206ENST00000578373 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
ERBB2-206ENST00000578373 IGLV2-23P01705 113 aa9.42□□□□□ -0.9
ERBB2-206ENST00000578373 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-206ENST00000578373 DSCAMO60469 2012 aa9.42□□□□□ -0.9
ERBB2-206ENST00000578373 FASNP49327 2511 aaKnown RBP9.42□□□□□ -0.9
ERBB2-206ENST00000578373 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
ERBB2-206ENST00000578373 TSSC4Q9Y5U2 329 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-206ENST00000578373 IGKV1D-37A0A075B6S9 117 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 CTSGP08311 255 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
ERBB2-206ENST00000578373 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
ERBB2-206ENST00000578373 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
ERBB2-206ENST00000578373 IGHV2-70DA0A0C4DH43 119 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 GAGE1Q13065 139 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 USMG5Q96IX5 58 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 CGB3P0DN86 165 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 CGB7P0DN87 165 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 CKS1BP61024 79 aa9.41□□□□□ -0.9
ERBB2-206ENST00000578373 IGHV7-81A0A0B4J1V7 117 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 IGHV1-69DA0A0B4J2H0 117 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 IGHV1-69P01742 117 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 BLCAPP62952 87 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 KLHL30-AS1Q8NEE0 82 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 TP53TG3Q9ULZ0 132 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 ACANP16112 2415 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 TEX22C9J3V5 150 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 M0R2P5 195 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 CFHR3Q02985 330 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
ERBB2-206ENST00000578373 RPL39LQ96EH5 51 aaKnown RBP9.4□□□□□ -0.9
ERBB2-206ENST00000578373 IGLV1-47P01700 117 aa9.4□□□□□ -0.91
ERBB2-206ENST00000578373 HLA-DRB4P13762 266 aa9.4□□□□□ -0.91
ERBB2-206ENST00000578373 RNF114Q9Y508 228 aa9.4□□□□□ -0.91
ERBB2-206ENST00000578373 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.91
ERBB2-206ENST00000578373 NDUFS8O00217 210 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 LINC00158P58513 81 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 ANAPC13Q9BS18 74 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 DEFB125Q8N687 156 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 MALP21145 153 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 ZNF462Q96JM2 2506 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 FAM223BA6NKX1 122 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 MSMBP08118 114 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 SH2D6Q7Z4S9 175 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
ERBB2-206ENST00000578373 F8VRH5 84 aa9.38□□□□□ -0.91
ERBB2-206ENST00000578373 RPL36AP83881 106 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms